Alosa sapidissima (American shad): 121705234
Help
Entry
121705234 CDS
T11137
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asad02000
]
121705234
03037 Cilium and associated proteins [BR:
asad03037
]
121705234
Transporters [BR:
asad02000
]
Other transporters
Pores ion channels [TC:
1
]
121705234
Cilium and associated proteins [BR:
asad03037
]
Other cilia and associated proteins
Stereociliary proteins
121705234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF6040
Motif
Other DBs
NCBI-GeneID:
121705234
NCBI-ProteinID:
XP_041942033
LinkDB
All DBs
Position
3:11644195..11659943
Genome browser
AA seq
683 aa
AA seq
DB search
MEVVSPGYVEMIELDMDDADSDPDELVHLGSDSESNDPGQPCIQITDECLPIETHSVSLG
VLSAMPSYTITRRKAELKSLKTMSRKKGVCRIRNMPLSVDKKRCLRREMRLDAEDPSTNT
AFQCGCHQFALRVGRLRMHLSTLFSVKPWRGSLKQVGARFGTVVLSYFLFLRTLLLYNVV
MSLLVGIFVALPQAILNPDQPQAQDPTFSGLELLTGEGYFTNSLLYYGYYTNSSLRVACF
QSDCGQAVKLGYSIPLAYILIIIISFFVTCVMLVYSVSKSLGKSLLSEGGLTACVFCSWD
FKVTKKSSILLKQANISTQLKELISDSVAQRRKRDGIVCQWLLCGLVWTICLGCTGICVL
GIYLYINFLHLKKIENVLGLPFLVSTVNLLLPGLFRTVGSMEYYQSPSTRAYVAISRNLL
LKTSILILLSFHWMTDSAIGFRSHQCWETYAGQELYRHMVADLIMTLLYTILGEFFWSQC
VLGVKMREKRPAFDIARNVLDLIYGQTLAWAGVLFSPLLPAIQILKLLVLFYTKKASLLL
NYRPSHQLWRTNQMNTILTTLLCFPAFTGAVVYVAYGIWMEKPDPICGPFRSLPTMFSLE
KEWEELEEAHASLAWLSVVYTHLLRKPLYLNIISTFLMMVIYAYRQKNDGQKKLITLLKK
QIRNEGEDKHFLISKLKEQEHQE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgagccctggatatgttgagatgatagaattggacatggatgatgcagat
tcagacccagatgagctggtgcacttgggcagtgacagtgagagcaatgatccaggccag
ccctgtatccaaatcacagatgagtgcctcccaattgagacccacagcgtctcacttgga
gtcctgtcagccatgccaagttacaccatcacaaggcgaaaggcagagctgaagagcctg
aagaccatgtccagaaagaagggtgtgtgtaggattcgaaatatgcccctgagtgtggac
aaaaagagatgtctgcgaagagaaatgcgtctggatgcagaggacccttccactaacaca
gcctttcagtgcggttgccatcaatttgctctaagggtgggaagactgcgtatgcacttg
tccaccctgttcagtgttaagccatggaggggctcgctgaagcaggtcggcgctcgcttt
ggcacggtggtcctgtcctatttcctcttcctgcggacccttctgctctacaatgtcgtc
atgtccctccttgtgggcatttttgtggcgctgccacaagccatactgaacccagatcag
cctcaagcccaagacccgacattcagtggcctggagcttctcactggggagggatacttc
accaactcactgttgtactatggctactacaccaacagcagcctgagggtggcctgtttc
cagtcggactgtgggcaggcagtaaagttgggctacagcatccccctggcctacatcctc
atcatcatcatctctttcttcgtcacctgtgttatgcttgtatacagtgtttcaaagtct
ctgggtaagagcttgctgtctgaggggggcttgacggcgtgtgtcttctgctcctgggat
ttcaaagtcaccaagaaatcatccatcctcctgaagcaagccaacatcagcacccagcta
aaggaactgatatctgacagcgtggcccagaggaggaaaagagatgggattgtgtgccag
tggctgctgtgtggactagtatggaccatttgtctgggctgtactgggatctgtgtcttg
ggcatctacttgtatattaacttccttcacctgaaaaagattgagaatgtcttagggctg
ccttttctggtgagcactgtaaatctgctgctgccaggccttttcagaaccgtaggcagt
atggaatattaccagtcccccagcacacgggcatatgtggccatctcaagaaatttgctg
ctgaagacaagcattctcatattgctttcctttcactggatgacagactcagcgataggt
ttcagaagtcatcagtgttgggagacctacgctggacaagagttgtaccggcatatggtt
gcagacctaatcatgaccctgctgtacaccattttgggagagttcttctggagtcagtgt
gtgctgggggtgaagatgagagagaagcggcctgcatttgacatcgcacggaatgttctg
gacctcatctatgggcagactctggcctgggcaggagtgctgttttctccattgctgcca
gctattcagattctcaagctacttgtacttttctacacaaaaaaggcaagtctgctgctg
aactaccgtccatcccaccagctgtggagaaccaatcagatgaacacaatcctcaccact
ctcctctgtttcccagccttcactggggcagttgtgtatgtggcctacggtatatggatg
gagaagccagaccccatctgtggtccattccggtcacttcccacaatgttttcactggag
aaagagtgggaggagttggaggaggcccacgctagtttggcatggctgtctgtggtctac
acgcacctactgaggaaacccctctatctcaacatcatttccacatttctcatgatggtg
atttatgcatatagacaaaaaaatgatggtcagaagaaactcattaccctcttgaagaag
cagatcagaaatgagggggaggataaacattttctcatcagtaaactgaaggagcaggag
caccaggagtga
DBGET
integrated database retrieval system
