KEGG   Alosa sapidissima (American shad): 121705277
Entry
121705277         CDS       T11137                                 
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1-like
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04010  MAPK signaling pathway
asad04145  Phagosome
asad04148  Efferocytosis
asad04310  Wnt signaling pathway
asad04370  VEGF signaling pathway
asad04510  Focal adhesion
asad04520  Adherens junction
asad04530  Tight junction
asad04620  Toll-like receptor signaling pathway
asad04810  Regulation of actin cytoskeleton
asad05100  Bacterial invasion of epithelial cells
asad05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:asad00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    121705277
   04310 Wnt signaling pathway
    121705277
   04370 VEGF signaling pathway
    121705277
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121705277
   04148 Efferocytosis
    121705277
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121705277
   04520 Adherens junction
    121705277
   04530 Tight junction
    121705277
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    121705277
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    121705277
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121705277
   05100 Bacterial invasion of epithelial cells
    121705277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asad04131]
    121705277
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asad04147]
    121705277
   04031 GTP-binding proteins [BR:asad04031]
    121705277
Membrane trafficking [BR:asad04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    121705277
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    121705277
  Macropinocytosis
   Ras GTPases
    121705277
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    121705277
Exosome [BR:asad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121705277
  Exosomal proteins of other body fluids (saliva and urine)
   121705277
  Exosomal proteins of colorectal cancer cells
   121705277
  Exosomal proteins of bladder cancer cells
   121705277
GTP-binding proteins [BR:asad04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    121705277
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU CagD
Other DBs
NCBI-GeneID: 121705277
NCBI-ProteinID: XP_041942109
LinkDB
Position
3:22153384..22157997
AA seq 192 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKRRKRKCSLL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggccataaagtgtgtagttgttggagacggggctgtgggaaaaacatgtctcctg
atcagctatactacaaatgccttccctggggagtatatccccacagtgttcgataactac
tctgcaaatgtgatggtggatgggaagccggtcaaccttggcttgtgggatactgcagga
caggaagattatgaccgactacgccctctttcctatccccagacagatgtgttcctgatc
tgtttctcccttgtgagccctgcatcttttgaaaatgttcgagcaaagtggtacccagag
gtcagacaccactgtcccaacactcccatcatcctcgtgggcaccaaacttgaccttaga
gatgacaaggacacaatcgagaagttgaaagaaaagaaactcactcccatcacataccca
cagggcctggccatggcaaaagagatcggagctgtgaagtaccttgagtgctccgccctg
acgcagcgtggcctgaagactgtgttcgatgaagccatcagggctgtcctgtgccctccc
ccagtcaagaggaggaagaggaagtgctctttgctctag

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