Alosa sapidissima (American shad): 121705357
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Entry
121705357 CDS
T11137
Symbol
top2a
Name
(RefSeq) DNA topoisomerase 2-alpha
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asad03032
]
121705357 (top2a)
03036 Chromosome and associated proteins [BR:
asad03036
]
121705357 (top2a)
Enzymes [BR:
asad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
121705357 (top2a)
DNA replication proteins [BR:
asad03032
]
Eukaryotic type
DNA Topoisomerases
121705357 (top2a)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
121705357 (top2a)
Centrosome formation proteins
Centriole proteins
121705357 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
DTHCT
DUF4467
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
121705357
NCBI-ProteinID:
XP_041942216
LinkDB
All DBs
Position
3:37692252..37723807
Genome browser
AA seq
1576 aa
AA seq
DB search
MAATEGPFKTLFENKTVSKAKKDDKRLSVERIYQKKTQLEHILLRPDTYIGSVEPLTQPM
WVFDELDGMNCRDITFVPGLYKIFDEILVNASDNKQRDKTMNCIKINIDRENNTISVWNN
GKGIPVVMHKVEKVYVPALIFGQLLTSSNYDDDQKKVTGGRNGFGAKLCNIFSTKFTVET
ACRESKQSFKQTWYDNMGRAGESQIKPFDGDDFTCITFRPDLTKFKMLSLDRDTVALMTR
RAYDIAGATKGVKVFLNGKKLPVSGFRSYVDLYLKDRTDETGNPLTVIHEVVNDRWEVCL
TMSEKGFQQVSFVNSIATTKGGRHTDYVADQVVSKLIEVVKKKNKAGVTVKPFQVKNHIW
LFVNCLIENPSFDSQTKENMTLQQKSFGSTCPLTDKFIKQATNCGIVESVMNWVKFKAQT
QLNKKCSAVKHTKIKGVPKLDDANDAGGKNSNGCTLILTEGDSAKTLAVSGLGVVGRDRY
GVFPLRGKMLNVREATHKQIMENAEINNVIKILGLQYKKNYSDPESLKTLRYGKLMIMTD
QDQDGSHIKGLLINFIHTNWPSLLRHNFLEEFITPIIKVSHKKQELSFYSIPEYEEWKDK
QANYKSWKTKYYKGLGTSTSKEAKEYFSDMARHRIPFKYSGPQDDEAITLAFSKKKIEER
KEWLTSFMVNRRQRREHNLPEDYLYGQSTNYLTYHEFVNKELVQFSNSDNERSLPCMVDG
LKPGQRKVLFCCLKRNDKREVKVAQLAGSVAEMSAYHHGEMSLMMTIVGLAQNFVGSNNL
NLLQPLGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPVVDDNLLKYNYDDNVRVEPEWY
MPILPMVLVNGSEGIGTGWASKIPNYDVREIVNNIHRMLNGEEPLHMIPSYKGFKGTIME
LMPNQYINTGEVAIIDSTTIEISELPVKTWTQTYKENVLEAMLNGTEKIQPLITDYKEYH
TDATVRFVIKMTEEKLREAEAAGLHKVFKLQNPITCVNSMVLFDHVGSLKKYESELEILR
DFFELRLRYYTLRKDWLLGMLGAEGAKLSNQARFILEKIQGTLVIENKPKKELIRMLQEM
GYDSDPVKAWKQSQEKVEEEVSEEGEEKEEEDTSGPDYNYLLNMPMWYLTKEKKDELCKQ
RDAKLTELNILEKKQPADLWKADLAAFTEELERVEEMERASMANVVVTQAKGKGGRSKVV
KVKDETMPTPQGRRVVPRITSGMKDVAAKKGKKPRVKSEDGVVMKMEFEDGAVEIGDENS
PGQPQGLAARLTKKLKREPKEKAMSKLGKQTTLQFKPVKKEGKKSNPWSDDEDEEFASTG
EPSPDLAPREKTQRATKAAPKFVFSSDDEEEDDEAAVGASGKGGKAAVISDDDNSDFVPE
PSQQDSDVDSPAVAPPPKKTAVKAVAPKAKAPSKAAAKSSAVEPSSKPAPTVKEAVPKKP
AAKKPTAAASKKKAPDSAQPSILDALSKPKPTSKASKKAATTSSSESEPISGKAAANRKR
KPVLDSDSDSDSGGLMARIKGKMGGAGKKTKKWEDDESFDLEGGIDSPVVERSKPSRAKK
AATYKIDSDSDSDFGF
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggcagctacagaaggaccgtttaagaccctgtttgaaaacaagaccgtcagcaaagcc
aagaaggatgacaagcgtctgtcggtggagcgcatctaccagaagaagactcagctggag
cacattttgctccggcccgacacctacatcggctccgtcgagcccctcacccagccaatg
tgggtgttcgacgagctggatggcatgaactgcagagacatcacctttgtcccgggtctc
tacaagatctttgatgagattctggtgaatgcctctgacaataagcagcgagacaagacc
atgaactgcatcaaaatcaacatcgaccgggagaacaacaccattagcgtgtggaacaac
ggtaaaggcatccccgtggtgatgcacaaagtggagaaggtgtacgtgcccgccctcatc
tttggacagctcctcacctccagtaactatgacgacgaccagaaaaaggtcacagggggt
cgtaacggattcggggcgaagctctgcaacatcttcagcaccaagttcactgtggaaacg
gcctgcagggagtccaagcagtccttcaaacagacctggtatgataacatgggccgtgcg
ggagagtcccagatcaagccgtttgacggcgatgacttcacgtgcatcacgttccggccg
gacctgaccaagttcaagatgctgtctctggaccgggacactgtagcgctcatgacccgc
cgagcctacgacatcgccggcgccaccaagggtgtcaaggtgttcctcaacggcaagaaa
ctcccggtgagcggtttccgtagctacgtggatctgtacctgaaggaccgcacggacgag
acgggcaaccccctcaccgtcatccacgaggtggtcaacgaccgctgggaggtctgcctg
accatgagcgagaagggcttccagcaagtcagcttcgtcaacagcatcgccaccaccaag
ggtggcaggcacactgactacgtagctgaccaggtggtgtccaagctcatcgaggtggtc
aagaagaagaacaaggcaggagtgaccgtcaagcctttccaggtgaagaaccacatttgg
ctgtttgtgaactgtctgattgagaacccaagcttcgactcccagaccaaagagaacatg
accctgcagcagaagagcttcggatccacctgtcccctcactgacaagtttatcaagcag
gcgactaactgtggcatcgtggagagtgtgatgaactgggtcaagtttaaggcccagacg
cagctcaacaagaagtgctccgccgtcaaacacaccaaaatcaagggcgtgcccaagctg
gacgacgccaacgatgcaggtggtaagaactccaacggctgcacgctgattctgactgag
ggagactcggccaagactctggctgtgtctggactgggcgttgtcggccgcgatcgttac
ggagtcttccccctccggggaaagatgctcaacgtccgggaggctacccataaacagatc
atggaaaatgctgagatcaacaacgtcattaagatcctggggctgcagtacaagaagaac
tactctgatcccgagtcactcaagacgctgcgctatggcaaactcatgatcatgacagat
caggatcaggacggatctcacatcaagggtctcctcattaatttcatccacaccaactgg
ccctctctgttgcgccacaacttcctggaggagtttatcactcccatcatcaaggtgagc
cacaagaagcaggagctgtccttctacagcatcccagaatatgaggagtggaaggacaaa
caagccaattacaagtcctggaagaccaaatactacaaagggttggggaccagcacatcg
aaggaggccaaagagtatttctctgacatggcccgccatcgcatccctttcaagtacagt
ggcccgcaagacgacgaggctatcacccttgcctttagtaagaagaagattgaggagcgc
aaagagtggctcaccagcttcatggtcaacagacgccagcggcgagaacacaacctgcca
gaggactatctatacggccagagcaccaactatctgacctaccacgagttcgtcaacaag
gagctggtgcagttctccaactcggataacgagcggtccctcccctgcatggtggacggt
ctgaagccgggccagaggaaggttctgttctgctgcctgaagaggaatgataagcgggag
gtgaaggtggcccagctggctggttctgtggccgagatgtccgcctaccaccacggcgag
atgtccctgatgatgaccattgtgggcttggctcagaactttgtgggcagcaacaacctg
aatctgctgcagcccctgggacagtttgggaccaggctacacggaggcaaggactcggct
agccccagatacatcttcaccatgctgagccccctggctcgcctgctgttcccagtggtg
gacgacaacctgctgaagtacaactacgacgataatgtgcgcgtggagcccgagtggtac
atgcccatcctgcccatggtgctggtcaacggctccgaaggcatcggcaccggctgggcc
tccaagatccccaactacgacgtgcgcgagatcgtcaacaacatccaccgcatgctcaat
ggggaggaacccctgcacatgattcccagctataagggcttcaagggcaccatcatggag
ctgatgcctaaccagtacatcaacaccggagaggtggccatcatcgacagcaccaccatc
gagatctctgagctgcccgtcaaaacctggacacagacgtacaaggagaatgttttggag
gcgatgttgaacgggacggagaagattcagcctctgatcactgactacaaggagtaccac
accgacgcgaccgtgcgcttcgtgatcaagatgaccgaggagaagctgagggaggcggag
gcagccggactgcacaaggtcttcaagctgcagaaccccatcacctgcgtcaactccatg
gtgctgtttgaccacgtgggcagtctgaagaagtacgagtcggagctggagatcctgcgg
gatttctttgagctgcgcctgcgctactacacgctgcgcaaggactggctgctcggcatg
ctgggagccgagggcgccaagctctccaaccaggcgcgcttcatcctggagaagatccag
ggcacgctcgtcatcgagaacaagcccaagaaagaactgatccgcatgctgcaggagatg
ggctatgactccgacccagtcaaagcctggaagcagtcacaggagaaggtagaggaggag
gtgtctgaggagggtgaggagaaggaagaagaggacacgtcgggcccagactacaactac
ctgctgaacatgcccatgtggtacctgaccaaggagaagaaggatgagctctgcaaacag
agggatgctaagctgactgagctgaacattctggagaagaagcagcctgctgacctgtgg
aaggctgacctggccgccttcactgaggagctggagcgtgtggaggagatggagcgcgcg
tcgatggcaaatgtggtggtgactcaggccaaggggaagggtggaaggtcaaaggtcgtg
aaggtgaaggacgagaccatgcccactcctcagggtcgccgggtcgtgccccgcatcacc
agcggcatgaaggacgtcgccgccaagaagggcaagaagcccagagtgaagagtgaggat
ggtgtggtgatgaagatggagtttgaggatggagcagtggagatcggagatgagaacagc
ccgggtcagccccagggtctcgccgcacgactgaccaagaagcttaagagggagcccaag
gagaaagccatgtctaagctgggcaaacagactacgctgcagttcaagccggtgaagaag
gaaggaaaaaagagtaacccgtggtcagacgatgaagatgaggagtttgcatccactgga
gagcccagcccagacctggcaccgagagagaaaacccagagagccactaaggctgctccc
aagttcgtcttctccagcgatgatgaggaggaggatgatgaggctgcagtcggagcctct
gggaaaggtgggaaggcagcggtcatcagcgacgacgacaacagcgactttgtacccgag
cccagtcagcaggacagtgatgtggactctcccgctgtggccccgcccccaaagaagaca
gcggtgaaggcggtcgccccaaaagcaaaggccccaagtaaagctgctgccaagtctagt
gcggtggagccttcctccaaacctgcgcctacagtcaaagaggccgtcccaaaaaagccc
gctgccaagaagcccactgctgctgcctccaagaagaaagcacctgactctgctcagccc
tccatcttagacgcgctctccaagcccaaacccacttcgaaagccagcaagaaggcggca
accaccagctccagcgaatcagagcccatctctgggaaggcagcagccaatcgcaagagg
aaaccagtgctggactctgactccgacagtgactctggtggcctcatggcccgcatcaag
ggcaagatgggtggtgccggaaagaaaacaaagaagtgggaagacgatgagagtttcgac
ctcgagggcggcattgactccccggtggtggagcgcagtaaacccagccgggccaagaag
gccgccacttacaagatcgactccgactccgactccgacttcggcttttag
DBGET
integrated database retrieval system
