Alosa sapidissima (American shad): 121705404
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Entry
121705404 CDS
T11137
Name
(RefSeq) serine/arginine-rich splicing factor 3-like isoform X1
KO
K12892
serine/arginine-rich splicing factor 3
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03040
Spliceosome
asad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121705404
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121705404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121705404
Spliceosome [BR:
asad03041
]
Common components
Common spliceosomal components
SR proteins
121705404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
121705404
NCBI-ProteinID:
XP_041942290
LinkDB
All DBs
Position
3:24882689..24890951
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AA seq
187 aa
AA seq
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MYDLKPNQKCMLWGFRPHPESNMHRDCPLDCKVYVGNLGNNANKAELEKAFSYYGPLRSV
WVARNPPGFAFVEFEDPRDATDAVRERDGRTLCGCRVRVELSSGEKRSRTRGPPPFESRR
PRDDYRRRSPPPQRRSPRRRSRSRSRSRSRSHSRDRRRERSRSQDRDNKPSRSFSRSCSR
SKSNDRK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatttgaaaccaaaccagaagtgcatgttatggggctttcggccccaccccgag
tccaacatgcacagagattgccctctggactgcaaggtatacgtggggaacctggggaac
aatgccaataaggcagagctggaaaaggcctttagctactatggccccctccgcagtgtc
tgggtggcaaggaaccccccagggtttgccttcgtggaatttgaagaccccagagatgca
acagatgctgtgagggaacgtgatggaaggacattgtgcggctgtcgagtgagggtggag
ctgtccagtggtgagaagcgctcccgcactaggggccctccaccgtttgagagtcgccgc
ccacgtgatgactaccgccggcggagcccgccacctcagcgcagatcccctaggagaagg
agcaggagcaggagcagaagtcgtagcaggtcccactccagagatcgcaggagggagagg
tctcggtcacaggacagggacaacaaaccatctagatctttctctagatcatgcagccgc
tccaagtctaatgacagaaagtga
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