Alosa sapidissima (American shad): 121705449
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Entry
121705449 CDS
T11137
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04137
Mitophagy - animal
asad04144
Endocytosis
asad04145
Phagosome
asad04148
Efferocytosis
asad05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121705449
04145 Phagosome
121705449
04137 Mitophagy - animal
121705449
04148 Efferocytosis
121705449
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121705449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121705449
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121705449
04031 GTP-binding proteins [BR:
asad04031
]
121705449
Membrane trafficking [BR:
asad04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
121705449
Endosome - Lysosome transport
121705449
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121705449
Exosomal proteins of other body fluids (saliva and urine)
121705449
Exosomal proteins of colorectal cancer cells
121705449
Exosomal proteins of bladder cancer cells
121705449
GTP-binding proteins [BR:
asad04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
121705449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
121705449
NCBI-ProteinID:
XP_041942377
LinkDB
All DBs
Position
3:28797002..28812914
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGAAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAGGRAKGGVDLQEAAPQSRSGQCCSSGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgcggaggaccagcacggaccaatggggcagccgcaggcaacaagatctgc
cagttcaagctggtgctactaggggagtcggcggtgggcaagtccagcctggtgctgcgc
tttgtcaaaggacagttccacgaataccaggagagcaccatcggagctgcgtttctcaca
cagactgtttgtttggacgacacaacggtaaagtttgagatttgggacacagcagggcag
gagcgctaccacagtctggccccgatgtactacagaggtgcacaagcagccatcgtagtc
tacgacatcaccaacacagacacattcactcgtgcaaagaactgggtgaaggagctgcag
agacaggctagtcccaacatagtcatcgccctggcggggaacaaggccgacctcgctaac
aagagagctgtagatttccaggaagcacaagcctacgcagacgacaatagcctgctcttc
atggaaacttctgcaaaaactgcgatgaacgtcaatgagattttcatggccatagcaaag
aaactgccgaagaatgaaccacagggcggcgccggagctggaggacgcgccaagggtgga
gtcgaccttcaggaggcggcccctcagagcagaagtggccaatgctgcagcagtgggaac
taa
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integrated database retrieval system