KEGG   Alosa sapidissima (American shad): 121705449
Entry
121705449         CDS       T11137                                 
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04137  Mitophagy - animal
asad04144  Endocytosis
asad04145  Phagosome
asad04148  Efferocytosis
asad05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:asad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121705449
   04145 Phagosome
    121705449
   04137 Mitophagy - animal
    121705449
   04148 Efferocytosis
    121705449
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121705449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asad04131]
    121705449
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asad04147]
    121705449
   04031 GTP-binding proteins [BR:asad04031]
    121705449
Membrane trafficking [BR:asad04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    121705449
 Endosome - Lysosome transport
    121705449
Exosome [BR:asad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121705449
  Exosomal proteins of other body fluids (saliva and urine)
   121705449
  Exosomal proteins of colorectal cancer cells
   121705449
  Exosomal proteins of bladder cancer cells
   121705449
GTP-binding proteins [BR:asad04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    121705449
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 121705449
NCBI-ProteinID: XP_041942377
LinkDB
Position
3:28797002..28812914
AA seq 220 aa
MAGRGGPARTNGAAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAGGRAKGGVDLQEAAPQSRSGQCCSSGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcgggtcgcggaggaccagcacggaccaatggggcagccgcaggcaacaagatctgc
cagttcaagctggtgctactaggggagtcggcggtgggcaagtccagcctggtgctgcgc
tttgtcaaaggacagttccacgaataccaggagagcaccatcggagctgcgtttctcaca
cagactgtttgtttggacgacacaacggtaaagtttgagatttgggacacagcagggcag
gagcgctaccacagtctggccccgatgtactacagaggtgcacaagcagccatcgtagtc
tacgacatcaccaacacagacacattcactcgtgcaaagaactgggtgaaggagctgcag
agacaggctagtcccaacatagtcatcgccctggcggggaacaaggccgacctcgctaac
aagagagctgtagatttccaggaagcacaagcctacgcagacgacaatagcctgctcttc
atggaaacttctgcaaaaactgcgatgaacgtcaatgagattttcatggccatagcaaag
aaactgccgaagaatgaaccacagggcggcgccggagctggaggacgcgccaagggtgga
gtcgaccttcaggaggcggcccctcagagcagaagtggccaatgctgcagcagtgggaac
taa

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