Alosa sapidissima (American shad): 121705506
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Entry
121705506 CDS
T11137
Symbol
elavl3
Name
(RefSeq) ELAV-like protein 3 isoform X1
KO
K13208
ELAV like protein 2/3/4
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121705506 (elavl3)
03041 Spliceosome [BR:
asad03041
]
121705506 (elavl3)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121705506 (elavl3)
Spliceosome [BR:
asad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121705506 (elavl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
BRAP2
RRM_occluded
RRM_3
RNA_bind
Motif
Other DBs
NCBI-GeneID:
121705506
NCBI-ProteinID:
XP_041942443
LinkDB
All DBs
Position
3:complement(4292270..4306505)
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AA seq
366 aa
AA seq
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MVTIISTMETQVSNGPSGTSLPNGPVISTNGATDDSKTNLIVNYLPQNMTQEEFKSLFGS
IGEIESCKLVRDKITGQSLGYGFVNYADPNDADKAINTLNGLKLQTKTIKVSYARPSSAS
IRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEAE
EAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFRLD
NLLNATYGVKSSPSLLPRFSPITIDSMTSLAGVNLTGPTGAGWCIFVYNLSPEADESVLW
QLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKT
SKQHKA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggttactataatcagcaccatggaaactcaggtgtccaatggtccaagtggaaccagc
ctaccgaacggcccagtcatcagcaccaacggtgccacagatgacagcaagaccaacctg
atcgtcaactacctgccccagaacatgacgcaggaggagttcaagagcctgttcggcagc
atcggagagattgagtcctgcaaactagtccgagacaagatcacaggccagagtttgggt
tatggatttgtgaactatgcagatcccaacgacgcagacaaagccatcaacacgctcaac
ggcctcaaactccagacaaaaactatcaaggtgtcatacgcaaggcctagctcggcctcc
attcgcgatgccaacctgtacgtgagcggcctccccaagaccatgagccagaaagacatg
gagcagctcttctcccagtacggacgcatcatcacctcacgcatcctagtagaccaagtc
acagcaggcatctcgcgaggagtgggcttcatccgttttgacaagcggaacgaggccgag
gaagccatcaagggactgaacggccagaagccgttgggcgcctctgagcccatcaccgtc
aagttcgccaacaaccccagccagaagacgggccaggcgctgctcacccagctctaccag
accgccgcgcgccgctatactggacccctgcaccaccagacccagcgcttcagactcgac
aatttactaaacgccacctacggagtcaagagttctccttctctcctccccaggttctcc
ccgatcaccatcgacagcatgaccagcctggcgggcgtcaacctcaccgggcccaccgga
gccggctggtgcatcttcgtctacaacctgtcgccggaggccgacgagagtgtgctgtgg
cagctgttcggaccgttcggtgcagtcaccaatgtcaaggtcatccgcgacttcaccacc
aacaaatgcaagggcttcggctttgtcaccatgaccaactacgacgaggcggccatggcc
atcgccagtcttaatggctaccgcctgggtgaccgcgtgctgcaggtctccttcaagacc
agcaagcagcataaggcctaa
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