Alosa sapidissima (American shad): 121705541
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Entry
121705541 CDS
T11137
Name
(RefSeq) F-actin-uncapping protein LRRC16A-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121705541
Membrane trafficking [BR:
asad04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
121705541
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Spectrin_5
B3GALT2_N
PBP-Tp47_c
Motif
Other DBs
NCBI-GeneID:
121705541
NCBI-ProteinID:
XP_041942502
LinkDB
All DBs
Position
3:11230703..11296996
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AA seq
1491 aa
AA seq
DB search
MTEEISDVPKELLESIKDAVGRKIKLSVKKRVKLEIKGDKVENRVLALASHRAYILTARI
PSKVEQTFNYLEIQGITCNKPTQLAIEYERGQVSLKLASTEEVNELVAHIGSCLQRICPG
LSPLKVMKKLVMEPADRVTNLQNLWDNQNLPEPGPCGGFSQQYRCVCDWLSLPYREEVQW
DVDTIYLTQDTRELNLQDFSHLENRDLVAIIAVLEYNQWFTKLATKDYKLQNPSPPPPSS
SSGIRSVLTTLGLPASTLCNGTSPRSADVCEQILRVVARSSRLEELVLDNAGLKTDFAQK
LANALAQNSNSGLQTLNLANNPLEDRGIASLGAQFAKLRKGLTHLNFSKTSLSPKGVNSL
AQSLSANQSIPSTLTHLDLSGNILRGDDLTNFYNFLGQPNSLATLDLSNTDCSLDLVCSA
LLRGSVQHLSVLNMSKGIFPHRKGKDIPPAFKHFFSSAMVLSSVNVSGTKLPPEALKALL
LGLASNSNVKEVSLDLSCCELGHCLRSGGSQILEGCIAEIPNISSLDISDNGLDSDMATL
LVWLAKNRSIRHLSLGKNFNNIKSKNLAAVLDNLVHMIQEEESPLTSLSLADSKLKTDLT
IVLNALGSNTSLTRVDISGNGMGDMGAKMLAKALQINSKLRTIIWDRNNISPQGLQDVAA
ALEKNFTIRFMPIPIIDASQALKASPEKTEDALLKIEHYLYRNHETRKYLQEQAYRLQQG
IVTTTTQQMIDQICVKVQDHLNSLRNSAETDTVMEDIKTAENLMKDARNSKTLLPNLYQL
GAISREELNGSSVGPIQEKLDSMAGEVARVMDEQLQSLLESMVDAAEGLCPHVMRKANLR
QDLMKASMGKMVVPRSFVKNTLLEQSGIDIINKISEVKLSLASFLSDRVVDEILEALSGS
QHTLAEHLSRKGQALTRQGSLDLDVPEERVSKRGTMELMEGERLDDLETCMMTPKSKRKS
IHSRMLRPVSRAFEMEFDLDKALEEVPVHVDDHHQAAPSKLEKKPPGSMGELPSEEAKKL
QHFTKLRPRRNKKTHSSKVPQIATAPPQEGEQNGLMGRVDEGVDEFFSRKVSKMDNKRPS
LRSSDSQDGEKKKKGGFLNLIKSRSSRSDKSHAASSPAPAPAPAPAAATTSGPSASSSTP
ASAPASTPLILEEPSSPKVRSPAPETRGRPPAAERSSSSDRSEELKTPDSIDSLDSEGSP
QSGRRYGVQVMGCGLLAEMKAKQEKRAFGSPKMPDSGSSLERPETPVAVKGQSLSTESRS
ASGVKSDGAVNLEKPALAEAKPDKPERPEKPDPSSKPRAPSTSQTPPSPKPPPQGTKPAL
AARPAIPQKPRPGCKSTDEAPDSPGASAPPKGPGLPHSLKRVPSLKEGTTLASRRSPQDA
ELPAEGSASSLGQDPERPATAPRVRPLRRTSSATAEEDTLQKAGRTSHTWPVKQGSTSTS
DPPLSSSPGPGRLAARENGTKSKDRSPAADRDKDKDKSKGEDGGNKDFVFI
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggaaatatcagatgttcccaaagaactgcttgagagcataaaggatgcggtg
gggaggaagatcaaactgtccgtgaagaagagggttaaactggagatcaaaggggacaag
gtggagaacagagtcctggcgcttgcctctcatcgggcctacatcctcaccgcgcgcatc
ccctccaaggtagagcagactttcaattatctggagattcaagggatcacatgcaataaa
ccgacacagttggccatagagtacgagcggggacaggtgtcactgaagctggcttcaaca
gaggaggtgaatgaattggtggcccacatcggcagctgtctgcagaggatatgtccaggt
ctctccccactgaaggtgatgaagaagctggtaatggagccagcggacagagtgaccaat
ctacagaatctatgggacaaccagaacctcccagagcctggaccatgcgggggattctct
cagcagtatcgctgtgtgtgtgactggctcagcctaccctacagagaggaggtccaatgg
gatgtagacacaatctatttgacccaagacacccgagagctcaatcttcaggatttcagt
cacctggagaacagggatttggtggctattattgcagtgctggagtacaaccagtggttc
acaaagctcgccaccaaggattataaactgcagaacccctcgcccccgcctccttcctcc
agctccggcattcggagtgttttgactaccctcggccttccggcctccacactctgcaac
ggaaccagtcccagatctgcagacgtgtgcgagcagattctgagggtggtggcccggtcc
agtcgcctggaggagctagtgctggacaacgccggactcaagacggactttgcacagaag
ctggctaatgcgctggcccagaactccaactcagggctccaaactctaaaccttgccaac
aacccactggaggacagaggaatcgcctcgttgggtgcccagtttgccaaactccgcaag
ggcctcacacatctcaatttctccaaaacctcactgtcacccaaaggggtgaatagcctt
gcccagtcactcagtgccaaccagtccatccccagcaccctcacccacctcgacctctca
gggaacattctgcggggggacgacctcacgaatttttacaacttccttggccaaccaaac
agcttggccacactggacctttccaatactgactgttcacttgacctggtctgttctgct
ctgctcagagggtcagtacagcacctctcggtgctcaacatgtccaagggaatcttcccc
cataggaaggggaaggacattcctcctgcatttaagcacttcttcagcagtgccatggtc
ctgagcagtgtcaacgtgtctggaactaaactaccaccagaggccttaaaagctcttctc
ctgggtctagccagtaactcaaatgtcaaagaggtttcattagatcttagctgctgtgag
cttggccactgtctgaggtcaggaggctctcagatcctggagggctgcatcgctgagatc
cccaacatctccagcctggatatctccgataatggacttgactctgatatggccaccttg
ttagtgtggttggccaagaaccggtcaattcgtcatctctctttaggaaagaatttcaac
aacatcaagtcaaaaaacctggctgctgtcctggacaacctggtgcacatgatccaggag
gaggaatcgccgctaacgtccctgtcccttgcggactccaagctgaagacagacctgacc
attgtgctgaatgcactgggcagcaacacctcactgacacgggtggacatcagtggtaat
ggcatgggggacatgggtgccaagatgctggctaaagcgctacagataaacagcaagctt
aggactatcatctgggacaggaacaatatcagcccacagggcctgcaggatgtggcagct
gcactggaaaagaacttcaccatccgcttcatgcccatccccattatcgacgcgtcccag
gcgctcaaagccagcccagagaagacggaggatgccctgctcaagattgagcattacctg
tacagaaaccatgaaacccggaaatacctccaagaacaagcttacaggttgcagcagggc
atcgtcacgacaaccacgcagcagatgattgaccagatttgtgtgaaagtccaagaccac
ctcaactcattaaggaattctgctgagacagacacggtcatggaggatatcaagaccgca
gagaacctgatgaaggacgccagaaactctaaaacactcctgcccaacctgtaccagctg
ggggcaatctccagagaggagctgaacggctcgtcagtggggcccatccaggagaagctg
gactccatggcgggggaggtggcccgggtcatggatgaacagctacagagtttgctggag
tcgatggtggacgcagcagagggtctgtgtccgcacgtaatgcggaaggccaacctgcgg
caggacctgatgaaggccagcatgggcaagatggtggtgccccgcagcttcgtcaagaac
accctgctggagcagtcaggcatcgacatcatcaacaagatcagtgaggtgaagctgagc
ctggcctccttcctctccgaccgcgttgtggatgagatacttgaggccctctctggttcc
cagcacacactggctgaacacttgtccaggaaagggcaggcactgacgcgccagggctct
ctggatctggatgtgcctgaggagagggtctccaaacggggcaccatggagctcatggag
ggggagaggctggatgatctcgagacttgcatgatgacccccaagtccaagaggaagagc
attcacagcagaatgctgcggcctgtctctcgtgcctttgaaatggagtttgacctggac
aaggctctggaggaagtgcccgtccacgtggatgaccaccaccaggctgccccctctaag
ctggagaagaagccgccggggtccatgggggagctgccctcggaggaggccaagaagctg
cagcacttcaccaagctgcggcccaggaggaacaagaagacccactccagcaaggtcccg
caaatcgccactgctcctccccaggagggcgagcagaacggcctgatgggacgggtggac
gagggagtggacgagttcttctccaggaaagtcagcaaaatggacaataaacggccttcc
ctccggagctccgactcccaggacggagagaagaagaagaaaggaggcttcctgaacctc
atcaagtcccgctcctccaggtccgacaagagccatgccgcctccagtccagcccctgcc
cctgctccagccccggccgccgccaccacctctggcccctcggcctccagctccacgcct
gcctctgcaccagcgtccacccccctgatcttggaggagccgtcctcacccaaggtcagg
agtccggcaccggagaccaggggccgaccccccgcggcggagcgcagtagtagctcggac
cgctcggaggagctgaagacgcccgactccatcgactcgctggactctgagggcagcccc
cagagcggccggcgctacggcgtgcaggtgatgggctgcggcctgctggccgagatgaag
gccaagcaggagaagagggcatttggctccccgaagatgccagactcagggtccagtctg
gaacgaccagagactcctgtggcagttaagggtcagtccctcagcactgagagcagatct
gcttctggagtgaagagtgacggagccgtcaacttagagaagcctgcgctggccgaggcc
aagccagacaagcccgagaggccggagaaacccgacccttcttccaaacccagggcccca
tccacctcccagacgccgcccagccccaagcccccaccgcagggcaccaaaccggcgctg
gccgcccggcctgccatccctcagaagccgcggcccggctgcaagagcaccgacgaagcc
cctgactctcctggcgctagtgcgccccctaaagggcctggcttgccccacagcctgaag
agagtgccctcactgaaggaggggaccacgctggcgagccggcgctcccctcaggacgcg
gagcttccagcagaaggtagtgcgtccagcctaggccaggaccccgagcgtccagccacg
gcccccagggtccgacccctgcgccgaacctccagtgccacagctgaggaggacaccctg
cagaaggcaggccggacgtcacacacatggcccgtgaagcagggatccacgtccacatct
gaccccccactgagctccagcccaggccccggccgactggccgcccgagagaatggcacc
aagtccaaggaccgctcgcccgctgctgaccgggacaaggacaaagacaagagcaaaggg
gaggacgggggcaacaaagactttgtatttatctga
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integrated database retrieval system
