KEGG   Alosa sapidissima (American shad): 121705590
Entry
121705590         CDS       T11137                                 
Symbol
kdm4ab
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:asad03036]
    121705590 (kdm4ab)
Enzymes [BR:asad01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     121705590 (kdm4ab)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     121705590 (kdm4ab)
Chromosome and associated proteins [BR:asad03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121705590 (kdm4ab)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_5
Other DBs
NCBI-GeneID: 121705590
NCBI-ProteinID: XP_041942583
LinkDB
Position
3:31245474..31303767
AA seq 1076 aa
MMATESSCGSRGIMTFYPSKEEFGNFSQYIAYMESQGAHRAGLAKVIPPKEWKPRQSYDD
IDDLLIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRKTANSDRFCSPHYDNFEELERKY
WKNVTFNPPIYGADVNGTLYDPVVKEWNVGCLQTILDTVERESGITIEGVNTPYLYFGMW
KTTFAWHTEDMDLYSINYLHFGEPKSWYCVPPEHGKRLERLAKGFFPGSSQNCEAFLRHK
MTLISPSILRKYGIPFEKITQEAGEFMVTFPYSYHAGFNHGFNCAESTNFAMQRWIDYGK
HAVLCSCRKDMVKISMDVFVQKFQPERYALWLAGKDTGLVDHSKPTPEAAEFLGSDYAQN
LQHNTDDHTAGEPTKSPTKHRIGLKRHQIALEVPENMLLKGTFEEEEESEEDDEKEYGKK
AYLHWPTLSASCGIRGVPDYTCLTSQHKLDEQHGIAEHLPQDTTLNKMEKRQLPVCAMKT
SLNIPLVRTSAGNQETDSVLHSLSALPRSVSKPGVASLLFHRTLSSSEALHVHNYSIQTA
TCYQHNSEKTPLSDLPASVKTDINLEEKPNKGPEQSSTHTVIKTSPVKLQLKGIEEKKKM
KSQRHQLSKLPHQHPLMLENTNDHDERTLLAPSDETSNQDNEKSSAEKGEVWTRLLTDLW
QHQPHNIKAEQSYNQRMGQQPPYCAICTLFYTYNQSDFTSSGINRNCNSKGPGEWRQSSL
PLIPEMCFNSSGSTEGHLSTPYLQEDGSSHLVSCVQCCVRVHASCYGISNDTSLDGWRCT
RCEASAITQDCCLCSLRGGALKRANNNKWVHVLCAVAVLEARFVSVVDRGPVDLSKIPLQ
RFKLKCYYCRKFTKKTMGCCVQCSHGRCPTAFHPTCAQAAGVLMYPDDWPFVVYITCHRH
KGISHPERNKVSLQDLVEGQQVICKHKNGRYYQAEVVELTKATFYEVIFDDGSFSDNLFP
EDITNRDCVELGPPPEGTVVQVRWTDGLVYGAKFVAEHVIPMYMVDFEDGSQLSVKRDDV
YSLNEDLPKRVKTRLSVASDMRFKGVFVEKEVNQDSKRQRVINSRYREDYIEPVIF
NT seq 3231 nt   +upstreamnt  +downstreamnt
atgatggccacagagtctagttgtgggtctagaggcattatgaccttctatcctagcaaa
gaagaatttggaaacttcagtcagtacatcgcctacatggagtcacaaggagcacacaga
gctgggttggccaaagtaatcccccctaaagagtggaaaccccgacagtcttatgatgat
attgatgatctgttaatcccagcaccaattcagcaggtggtcacaggccagtcaggtctg
tttacccaatacaacatccagaaaaaggccatgacagtcagagagtttcgcaagactgca
aatagtgatcggttctgcagcccacactatgacaattttgaagagctggaaagaaaatac
tggaaaaatgtgaccttcaatcctcctatttatggtgcagatgtaaatggaacattgtat
gacccagttgtcaaggagtggaacgtgggttgccttcaaacaatcttagatacagtggag
agggagagtggaatcacgattgagggggtgaacacgccttacttgtactttggcatgtgg
aaaacaacatttgcttggcatactgaagacatggacctctacagcatcaactatctacat
tttggagaacctaaatcctggtattgtgttccccctgagcacggcaaacgattggagcgt
ctagccaaaggtttttttcctggaagctcacagaactgtgaagcttttttgagacacaag
atgactcttatatctccctcaattctacggaaatacggcattccatttgaaaaaattact
caggaagcaggagaatttatggtcacatttccatacagttaccatgctggtttcaaccat
ggattcaactgtgctgaatcaacaaattttgcaatgcagagatggattgattatggaaaa
catgctgttctgtgctcatgtaggaaagacatggtgaagatctccatggatgtctttgtt
cagaagtttcagccagaacgctatgctttgtggctagcagggaaagacactggtcttgtt
gaccactccaaacccacaccagaggcagctgagtttttaggcagtgattatgctcagaat
ttacaacacaacacagacgaccacacagcaggagaaccgacaaagagcccgaccaaacat
aggattggactgaagagacaccaaatagctttagaggttccggagaacatgctcctcaaa
ggcacatttgaggaggaggaagaatctgaagaggatgatgaaaaggagtatggaaagaag
gcctatctacattggccaactttgtcagcatcttgtggaatcagaggtgtacctgactac
acatgcctcaccagtcagcacaaattggatgagcaacatggaatagctgagcatttacct
caagatactacactgaataaaatggaaaagagacaattacctgtgtgtgctatgaagaca
agtttaaatatccccttggttagaaccagtgctggaaaccaagaaacggatagtgtgctg
cattccctctcagccctacccagatctgtttcaaaaccaggagtggcaagtcttctcttt
cacagaactctgagttccagtgaagccctacacgtgcacaactattctatacagacagcc
acatgttatcagcacaactcagagaagactccattatctgacttaccagccagtgtaaag
actgacatcaacttggaggaaaagcccaacaaaggaccagagcagtctagtacacacaca
gtaataaaaacaagcccagtcaagttgcagttgaaaggcattgaggaaaagaaaaaaatg
aagagccagcgccatcaactcagcaagcttcctcatcagcatcctctgatgctagaaaac
accaatgatcatgatgagagaacactacttgcaccatcagatgagacatccaatcaggac
aatgagaaaagcagtgcagaaaagggtgaggtttggactcgtctcctcaccgatctgtgg
cagcaccagccccacaacataaaggcagaacaatcatacaatcagcgcatgggccagcaa
cccccatattgtgcaatctgcacgctcttctatacatacaaccagagtgattttaccagc
agtggcatcaacagaaattgtaacagtaagggcccaggagagtggaggcaaagcagtttg
cccttaatccctgaaatgtgctttaactccagtggtagcacagaaggtcacctctccacc
ccatacctacaggaggatggaagcagccacctggtcagctgcgtgcagtgttgcgttcga
gtccacgctagttgctatggcatttccaatgacacatctttggatggttggaggtgcaca
cgttgtgaagccagtgcaattactcaggattgttgtttatgttctttacgaggaggagcc
ctgaaaagagccaataacaacaagtgggtgcatgtattatgtgctgtggcagttttggaa
gcccgctttgtaagcgtggtagaccgtggtcctgttgacctcagcaagatccctttgcag
aggtttaaacttaaatgttactattgtagaaagttcaccaagaagacaatgggttgctgt
gtacagtgctcacatggtcgttgtccaactgccttccacccaacctgtgcccaagccgca
ggtgtcctcatgtatcctgatgactggccctttgtagtatatatcacctgccatcgtcat
aagggtatttcacacccagagcggaacaaggtatccctccaagatttggtggagggccag
caagtaatctgcaaacacaagaatggacgctattaccaagctgaagtagtggagctgaca
aaggcaaccttctatgaggtgatctttgatgatggctcctttagtgataacctcttccct
gaagacatcacgaacagggattgtgtagagctcggcccaccaccagagggcactgtggtt
caggtgcggtggacagacggactggtatatggagccaaatttgtagcagaacatgtgatt
ccaatgtatatggtggactttgaagatggctcacaactcagtgtgaagagagatgatgtc
tatagcctgaatgaagatctaccaaagcgtgtgaagacacgactgtccgttgcttcagat
atgcgcttcaaaggtgtttttgtggagaaggaggtcaaccaggattccaagagacagcga
gtcatcaattcacgctatagagaagactacattgagcctgtcattttttga

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