Alosa sapidissima (American shad): 121705604
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Entry
121705604 CDS
T11137
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121705604
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
Other domain-containing proteins
FERM domain-containing proteins
121705604
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
FERM_f0
FERM_C_FAK1
PDZ_2
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
121705604
NCBI-ProteinID:
XP_041942612
LinkDB
All DBs
Position
1
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AA seq
1714 aa
AA seq
DB search
MEERDRSRSPSRKTSRVEQVVGRWLRRSRDSTSRERVLEESRVVDNGSSEQRSFPIRATV
QLPRDPNLQSHGFTVTTDTPLLVHEVIPGGPADGKLMPGDQPLKINNVAVDDLSAEQAAD
LIRECEETLTITVLRITVGPKSSFITPEKRAQLRSNPVKVRFAEEVVVNGHSQGNSLLFL
PNVLKVYLENGQTKAFKFEPKTRVKDIVMTLKEKLSITRIEHFSLLLEQQYSITKLLLLH
EDELIQQVVEKKETHDYRCLFRVCFMPRDPQDLLDEDPVAFEYLYLQCVSDVLQERFAVE
MKCNTALRLAALHIQERLASTGQSPKTHLKTITREWGIESFVSNTLLKNMREKDLRKAIS
YHMKKCIYLEPKQKLISVNQARLNYLYEMAELKSYGGKSFSATMLLQDRESMVSLLVGLQ
YGVSQVVNHKLSVINTLTEFSSITRVELIPESERVSLVKIYLQDIKPITLLLESVAAKDL
SCLVAGYCRALVNPNICVFPWNAHRKSPRISTEEGYVSHCGSDSDDSDTDVDALLAHVAS
ATRSSKQTADGSSSEQTASREGGEEEEEEEETSQSPQQEETEEHTEQEEGGGEEQDMETE
PTEEVSEKMEEQRTREVVGGVEGADGEAQEVEVEGGAEGQTEGGGGEEQRCYIMLEEPAS
EASDSGRTDSRFLASLSSDSMDALEEDDLLTLCSTLRPCHLSVGHAHNNPPLSPRTPHTA
TDLYGVGEGDPFLCYAALSNMVDCLPSPPEASEDEEEEERSLSYRGLDLSKLTPLSAKGG
CVFTFEQCDARHYYNICSNVTPDSARSLPRALPDRPEEEKEEEEEEEVAEMEPVPILQPP
PGFGDSSSDDEFFDAQERLTSPEQPSSANMTRENSTESSAMKRTLSLSDIGICVSESGRE
GGGECSEEAELEDRDSALSWTRRKSGKQRRSYLETDYTSLVSYPEQNHRPKNHYDALISA
SGQEPAEDLSQAPCPTVSPLTSTEPEPAQLENKPITSFCSRPLTNALAEPRGHHRRHLST
QVEMEVEPDAMETKAVTELLASSISAVRRSATLPAADLRASRRGEVASAEGLLDRLSEGA
FAGHLFFRRTAEVPLEEGEGEGHCSLPRPRSFTVGHVDSPTTRHSPVIPTISYTPSPDEE
EEAGSIGEAAQVSNSPSLTEAFRRGLSVSRESLTHAGEANELDSDYSFQEPPKSSMEPTS
GFLLSPCSSGSMIGRLSASTLRGKIQSLPLYLSRSQEALSENRPDSGTPQRRRFSEASRC
RRADRSPCTQLGWEEGTPEVTEVKVVTIVSEEVTEVIEEMVEVSHRSPGAQQRAETKVDS
FPMSSEQETLSATRAEQPVSTGPPSVVVTTQNLPNTGPHMGNHTHTHPALTGCGLFRNCE
SQPTDTQPQALPSPCPHGKPELGCRSALALGCEVLLDTAQAPLEVCDCQAVYTNCFSGVL
DGSSFDDELTVYEFSCRTKPDTLVVSPVSAIPQPLSSSPFSPSSSSSSSSPLPSFPCPIL
PPSSSTELSPLLSPFEPVNCFLSDPEEEAIATLLARRYPSPPAGFAALQRDTETLLSVLA
GAAKSRSECESPEHHRDSCAAHFSENKRRLHEEARGLLAGCQRVVRAGQTAEDTLQALAL
SFRALVQLASVCLCFSSCPRCRQRHGQALAGLADVARTYREFARTAECVGSAAAATGKRS
SCHDLSIKLLARQCTALTTSVFCLTQLFRTLTAL
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacgggacagaagccggtctccgtcccgaaagaccagccgtgtggagcaggtg
gtggggcgctggttacggcgctcacgagactccaccagcagagagcgtgttttggaggag
agtcgtgttgttgacaacggctcatcagagcagaggagtttccctatcagggcgacagtg
cagctgccccgagaccccaacctccaatcacatggcttcaccgtgaccacagacacgccc
ctactggtgcacgaggtcatcccaggaggcccggccgatgggaagctcatgcctggagat
cagcctctcaagatcaacaatgtagcagttgatgacctctctgcagagcaagctgctgac
ctcatcagggagtgcgaggagaccttaacaatcacagtcctcaggattacagtggggccg
aagtcatcgtttataactccggagaagagagcccagctgaggtccaacccagtgaaggtg
cgctttgcagaggaggtggtggtcaacggccactctcagggcaactccttgcttttcttg
ccaaatgttctgaaggtttacctggagaacggccagaccaaggccttcaagtttgagccc
aagaccagagtcaaggacattgtgatgactctgaaggagaagctgtcaatcacgcgcatc
gagcacttctccttgctgctggaacaacaatacagcatcaccaaactactgctgcttcac
gaggatgagctcatacagcaggtggtggagaagaaggagactcatgactataggtgtttg
ttcagagtttgtttcatgcccagagacccccaggacctcctggatgaagacccagtggcc
tttgaatacctctatctacagtgtgtgagtgatgtgttgcaggagaggtttgcagtggag
atgaagtgcaacactgctctccgcttggcagcactgcacatacaggagagactggctagc
actggacaatccccaaaaacacacctgaagaccattacgagggagtggggcattgagagt
tttgtctccaacaccctgctgaagaacatgagggagaaggacctgaggaaggccatcagc
taccacatgaagaagtgcatctacctggagcccaaacaaaagctgatatccgtcaaccag
gccaggctgaactacctgtacgagatggcagagcttaaatcttacggagggaagtctttc
agtgccacgatgttgctacaggacagagagtcgatggtcagccttctggtggggctccag
tatggcgtgagccaggtggtcaaccacaagctgagtgtcatcaacacactgacggagttc
agcagcatcaccagagtggagcttattcctgagtccgagcgtgtcagcctggtgaagatc
tacctgcaggacatcaagcccatcacccttctgctggagtcggtggcagccaaagacttg
tcttgtctggtggctggatactgcagagctttggtcaaccccaacatctgtgtgtttcca
tggaatgcccatcgcaagagccctcgcatatcaacagaggaaggttacgtgtctcattgt
ggaagtgattctgatgattcggacactgacgtggacgctttgctggcccacgtggccagc
gccacccggagcagcaagcagacggcagacgggtccagctctgagcagacggcgagccga
gagggaggagaggaggaggaggaggaggaggagacgagccagagcccacagcaggaggag
acagaggagcacacagagcaagaggaggggggaggggaggagcaggacatggaaacagaa
cccacagaggaggtgagtgagaagatggaggagcagaggactagagaggtggttgggggt
gtggagggggctgatggggaggcgcaggaggtggaggtggagggtggagcagagggacag
acggaggggggcggaggagaggagcagcgctgctacatcatgctggaggagcccgcctcc
gaggcgtccgactccggccggacagactcccgctttctggccagcctgtccagcgactcc
atggatgctctggaggaggacgacctcctgaccctctgctccacccttcggccatgccac
ctcagcgtaggccacgcccacaacaacccgccgctgtcgccacggacaccgcacactgcc
accgatctctacggcgtcggcgagggcgaccccttcctgtgttacgcggccctgtccaac
atggtggactgtctgcccagccctcctgaggcgagcgaggatgaggaggaggaagagcgg
agcctcagttatcgaggcctggacctctcgaaactaacccccttgtctgcaaaagggggt
tgcgtgttcacgttcgagcagtgtgatgcacgccattactacaacatctgctccaacgtg
acccccgacagtgccaggagtctgccacgagccctgccagacagaccggaggaagagaag
gaggaggaggaggaagaggaggtggcggagatggagcccgtgcccatcctccagcctccg
ccaggcttcggagacagcagctccgatgacgagttctttgatgcgcaggagagactcacc
tccccagaacagccgtcgtcagccaacatgaccagagagaattcaacagaatccagcgcc
atgaagcggaccctgagcctcagtgacatcggcatctgtgtgagcgaatccggcagagag
gggggaggggagtgcagcgaggaggctgagctggaggacagagacagcgccctctcctgg
accaggaggaagtctggaaagcagcggcgctcctatctggagacagactacacgtcactg
gtgtcctatccagaacagaaccacaggcccaagaaccactatgatgccctgatctcagcc
agcggccaagagccagcagaggacctgagccaggcgccctgccccacggtgtcacctctg
accagcactgagcccgagcccgctcagctggagaacaagcccatcaccagcttctgcagc
cggccactgaccaacgccctggcggagccgcgaggtcaccaccgccggcacctgtccact
caggtggagatggaggtggagccagatgccatggagacgaaagccgtcaccgagctgctg
gcatcctccatcagtgccgtgaggcggagtgccaccctcccagcggcagacctgagggcc
agcaggagaggcgaggtggcatcggcagagggtttgctggacaggttgtcggagggggca
ttcgctggccacctcttcttcaggcgaaccgctgaggttcccctagaggagggggagggg
gagggccactgttctttgcctaggcctcgctccttcaccgtgggtcacgtggactccccc
accacccggcactcacccgtcatccccaccatatcctacacccccagccctgatgaggag
gaggaagcggggtcaattggggaagcagcccaagtcagcaatagccccagcctgaccgag
gccttcaggagggggctatcagtgagccgtgagagcctgactcacgctggagaggcaaac
gagctggacagcgactactcctttcaggagccacccaagtcctcgatggagcccacctcc
ggcttcctgctgagtccctgctcctcgggcagcatgatcggccgactgtcggcgtccaca
ctgcggggcaagatccagagcctgcccctctacctgtcccgctcgcaggaggccctgagc
gagaaccgccccgatagcggcacccctcagaggaggaggttctccgaggccagccgctgc
cggagagcggacaggtcgccgtgcacacagctgggctgggaggaaggcactccagaggtc
acggaggtcaaagtggtgaccatagtgtctgaggaggtgaccgaggtgatcgaggagatg
gtggaggtcagccaccgcagtccaggggcccaacaacgagccgagaccaaagttgactcg
ttccccatgagttcagagcaggaaaccctctctgccacgagggctgagcaaccggtcagc
acaggtccgccctcggtggtggtgaccacccagaacctgcccaacacaggcccccacatg
ggcaaccacacacacacccaccctgccctcacgggctgcggcctcttcagaaactgtgag
tcccagcccacggacactcaaccccaggccctgcccagtccctgcccccacgggaaaccc
gagctgggctgccgcagtgcgctggcgctgggttgtgaggtgctgctggacaccgcccag
gcccctctggaggtgtgcgactgccaggccgtctacaccaactgcttcagtggagtcttg
gatgggagcagcttcgacgatgagctgaccgtctacgagttctcctgccgcacaaagccg
gacactcttgtggtcagtccggtgtcagctatccctcaaccactgtcatcctccccattc
tctccctcatcctcctcctcttcttcctctcctcttccttctttcccctgcccaattctg
cccccctcttcctccactgagctcagtcctcttctctcccctttcgaaccggtcaactgc
ttcctgtctgacccagaagaggaggccatcgccactttgctggcccgccgctatccgtcg
ccgcccgcgggcttcgctgcgctgcagcgggacacagagacgctcctttctgtgctggcg
ggcgcggccaagtctcggagcgagtgcgagagcccggagcaccaccgggactcgtgcgcg
gcccacttctccgagaacaagcggcggctgcacgaggaggcgcggggtctgctggcgggc
tgccagcgtgtggtgcgcgccggccagacggccgaggacaccctgcaggcgctggcgctc
agcttccgcgcgctggtgcagctggcctccgtctgcctgtgcttctccagctgcccgcgt
tgccgtcagcggcacggccaagcgctagcggggctggccgacgtggcgcggacctaccgg
gagttcgcccgcaccgccgagtgcgtgggcagcgcggcagcggccacgggcaagcgcagc
agctgccacgacctcagcatcaagctgctggcacgccagtgcaccgccctcaccacctcc
gtcttctgcctcacgcagctcttccgcacactcaccgcactctga
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integrated database retrieval system
