Alosa sapidissima (American shad): 121705640
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Entry
121705640 CDS
T11137
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121705640 (vps35l)
Membrane trafficking [BR:
asad04131
]
Protein recycling
Others
Retriever complex
121705640 (vps35l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
121705640
NCBI-ProteinID:
XP_041942675
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All DBs
Position
3:complement(39723573..39750899)
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AA seq
966 aa
AA seq
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MAAVQWHSRMRKYSAELQACRSESLAVEGNEYHPLKPIMVTESKSRRTARRGSTSSTASS
SSSSSVATDPLSSLLDGTDPLSLFAASGDAPTLTHSASAGELGRKRRDRDEESVGVDFES
WSSKRAEILARFTTTEKLSINLFMGSDKGKATSPSSAVSEKVRTRLEELDDLEEGSQREL
LNLSQQDYVNRIEELNQSLKEAWSSDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLITD
ILDTFGRLVYDRIWTMCSDPHPPPEGFSPDDVNDTAKETCLNWFFKIASIRELIPRLYVE
AAILKCNRFLSRSGIQETLPRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPQLKDCLNKN
FFDLLASFRQIHGDSVQSQLVLQRVEVPAYLTLYSPAIHWILQCVSYRAPEALLMEMMER
CKKLGNNALLLNSVMWAFRAEFIATRATDFITMIKQCDEAGFPKHLLFGSLGRSLASADP
PEAERLSILNDAWKVITKIRSPQDYINCAEIWVEFTCRHFTKREVNAVLADIIKHMTPDR
AFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFLDMFQKDSVRVEVCRSIMEVFIKHQ
QEPTRDPVILNALLHVCKTMHDSVNSLTLEDEKRSLALLINGFIRLVSFGRDFEQQLSFC
VEARATFCNLEPVIIQLIHTVNQLAMETRRVMKGNHSRKTAAFVRACAAYSFITVPSLTS
IFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSMLVEGKQRCTESLLLDFIN
NFMATLLVVPDHPEQGVLYLVRGLLNMVQDYTWEENSSAKVRVYVSALPLLAAMSQETYL
YTIPKVDSNETLYGGDPKFMAEINKLCDTLIGQVLDHLKALGNGEGLRKQSSLAFSLFNA
LLAHGDLRNNKLNQLAVNLWNLSHKHGHCDTRTAVRTLEHIKHLAQQPELNHLGEIIPRL
ALQSRA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgttcagtggcactcgcgaatgcgcaagtactctgcggagctgcaggcgtgt
cgctccgagtcgctggcggtggaggggaatgagtaccaccccctcaaacccatcatggtg
acggagtccaagtctcggcgcactgctcggcggggcagcacctcgtccaccgcctcctcc
tcctcgtccagctccgtggcgaccgaccccctgagctccctcctggacgggactgaccca
ctgtccctattcgccgcctccggcgacgcccccacactcacacacagcgcttctgcaggg
gagctgggcaggaagcgtcgtgatcgggacgaggagagtgtgggcgtggactttgagtcg
tggtcaagcaaacgagcggagatcctggcacgcttcaccaccaccgagaaactctccatc
aatctcttcatgggctcagataaaggaaaggctaccagtcctagttcagcagtctcagag
aaagttcggactcgtctggaggagttagatgatctggaggagggttcccagagggagctg
ttgaatctgtctcagcaggattatgtgaatcgtattgaggagctgaatcagtctctgaag
gaggcctggagctcagaccagaaggttaaagcactcaagatagtcatccagtgttctaag
ttgctgtcagacactgcagtgatccagttctaccccagcaagtttgtgctcatcacagac
atcctggacacctttggccgtctggtgtacgatagaatctggactatgtgctctgaccca
catcctccgccagagggcttttccccagatgatgtgaatgacactgccaaagagacctgc
ctcaactggttcttcaagatcgcctccatcagagaactcataccccggctatatgttgaa
gcggccatcctgaaatgcaatcgtttcctgtcaagatcggggatccaggagacgttgccc
cgcttgaccgccatgatccggggcatcggagacccgctggtggccgtctacgccagagcc
tacctgtgcagggtggggatggaggtggctcctcagctgaaggactgtctgaataagaac
ttcttcgacctgctggcgtcgttccggcagatccacggcgacagtgtccagagccagctg
gtcctgcagcgcgtcgaggtccccgcctacctgaccctctactcacccgctatccactgg
atcctgcagtgtgtgtcctacagggccccagaggctctgctgatggagatgatggagaga
tgtaagaaactgggcaacaatgctctgctgttgaactctgtgatgtgggcgttccgggcg
gagtttatcgctaccagggcgacggacttcatcaccatgatcaagcagtgtgacgaggct
ggattcccaaaacatctgttgttcggctctttggggcggagtctggcttctgcggacccc
ccagaggctgagcgtctgtccatcctgaacgacgcctggaaggtcatcaccaagatccgc
agtccgcaggattacatcaactgtgcagagatctgggtggagttcacctgccgacacttc
accaaacgggaggtcaatgctgtactggctgacatcatcaaacacatgaccccagaccgt
gcctttgaggacgcgtatccacagctccagtctgtgatcagaaagatcctgacgtacttc
catgacttctccgttctcttctctatggagcgcttcctgccgttcctggacatgttccag
aaggacagtgtgagagtggaggtgtgccgctccatcatggaggtcttcatcaagcatcaa
caggagccaactcgtgaccctgtaatcctgaacgccttactgcacgtgtgcaagaccatg
cacgactctgtgaattctctgaccttggaggatgagaagcgatctctggctctgctcatc
aatggctttatacgcttggtgtcgtttggtcgtgactttgaacagcagttgagtttctgc
gtggaggcaagagcaaccttctgtaacctggaaccggtcatcatccaactcatacacacg
gtgaaccagctggccatggaaacacggcgtgtgatgaaggggaaccactcccgaaaaaca
gcggcctttgtgcgggcgtgtgctgcctacagcttcatcaccgtcccctctctgaccagc
atcttcagccgcctcaacctctacctgctgtccggccaggtggcgctggccaaccagtgt
ctttcccaggcggacgcgttcctgaaggcggcggtgagtgtgctgccggaggttccccgc
agcatgctggtggagggcaagcagaggtgcaccgagagcctgctgctcgacttcatcaac
aacttcatggccaccctgctcgtagtgccggatcatcctgagcagggtgtgttgtacctg
gtgcgagggctgttgaacatggtgcaggattacacctgggaggagaacagcagcgctaaa
gtccgagtttacgtcagcgccctccccttactagcagctatgagtcaggagacttactta
tataccatacctaaagtggactccaatgagaccctgtacggaggggaccccaagttcatg
gccgagatcaacaagctgtgcgacaccctgattggtcaggtgctggaccacctcaaagcc
cttggcaatggagagggcctgcgtaagcagagctctctggccttcagtctgtttaacgct
ctgctggcacatggtgacctgcgcaacaacaagctcaaccagctggccgtcaacctgtgg
aacctcagccacaagcacggacactgcgacacgcgcacggcggtgcgcaccctggaacac
attaagcacctggcacaacagcccgaactcaatcaccttggagagatcatcccccgcctc
gccctgcagtcacgtgcatga
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