KEGG   Alosa sapidissima (American shad): 121705777
Entry
121705777         CDS       T11137                                 
Symbol
elob
Name
(RefSeq) elongin-B isoform X1
  KO
K03873  elongin-B
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121705777 (elob)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:asad04121]
    121705777 (elob)
   03400 DNA repair and recombination proteins [BR:asad03400]
    121705777 (elob)
Ubiquitin system [BR:asad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     121705777 (elob)
   Cul5 complex
     121705777 (elob)
DNA repair and recombination proteins [BR:asad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121705777 (elob)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 121705777
NCBI-ProteinID: XP_041942926
LinkDB
Position
3:complement(17800978..17805474)
AA seq 119 aa
MDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKRTPEEQRLYKDDVLLDDSKTLGDC
GFTNQTARPQAPGTVGLAFRVSEDSFEPLRVEPFSSPPELPDVMKPQDSSSTANEQAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatgtgttccttatgatcaggcgtcacaagacgaccattttcacagatgcaaaagag
tccacaactgtttacgagctaaaacggatcgtggaaggcattctgaaaaggacacctgaa
gagcaacggctgtacaaggatgatgtattgctggatgacagtaagacacttggagattgt
ggatttacgaatcaaacagcaaggccacaggccccaggaactgttggactggctttccgt
gtcagtgaagactcttttgaaccactaagggtggagcctttctccagccctcctgagcta
ccggacgtcatgaagccccaggactccagcagcactgccaacgagcaggctgtgcagtga

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