Alosa sapidissima (American shad): 121705819
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Entry
121705819 CDS
T11137
Symbol
ush1ga
Name
(RefSeq) Usher syndrome type-1G protein homolog isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121705819 (ush1ga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121705819 (ush1ga)
Cilium and associated proteins [BR:
asad03037
]
Primary cilia and associated proteins
USH complex and associated proteins
121705819 (ush1ga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
SAM_7
Motif
Other DBs
NCBI-GeneID:
121705819
NCBI-ProteinID:
XP_041943000
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All DBs
Position
3:complement(11399488..11410450)
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AA seq
478 aa
AA seq
DB search
MNDKYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVGRGGNPDK
CDIWGNTPLHLAAANGHQNSLSFLVSFGANIWCLDNDYHTPLDMAATKNHMDCVRYLDSI
AAKQTALNPKLVGKLKNRAFHDAERRIKDCVKMQRKHHRRMERKFQREAPEASVSDAMSF
SSYTGSSVSRKLLNTATISVPYSQATLHATTRGKTKIQKKLEKKKQGDGTFKIYEDSRKS
VRSLSGLQLGNDVMFLKQGTYVNPRDRTRRNIRHMFPSDNEDAISRAISEPDLHGPDIDH
SEVSTDSGHDSLFNRPGLGTMVFRRNYVSGGLFDIGVRDESSLVDLEEATAAFPPANLRL
RSRLQRPPSVGEDSIGSARSLQQRNADDLPWDEQELGLDDDDEPESNPLEVFLAAQFMNE
FMPILRREKIDLQALLLCSDADLKGIHIPLGPRKKMMDACKRHVETIEDPEAMVDTAL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaagtaccataaggcggctcgggatggctacctcgacctgctcaaagaggct
acacggaaggacctcaatgcacctgatgaagatggaatgacaccgacattatgggcagct
tatcacggcaatttggaagccctacgattaattgttggaagaggagggaaccctgataag
tgtgacatatggggaaataccccactccacctggcagctgccaacggccaccagaactcc
ctgtccttcctggtgtcatttggtgcaaacatctggtgcctggacaacgactaccacacc
ccactggacatggctgccaccaagaaccacatggactgcgtgcgctacctggactccatc
gctgccaagcagacggccctcaaccccaagctggtgggcaagctgaagaaccgggcgttc
cacgacgccgagcgccgcatcaaggactgcgtcaagatgcagaggaagcaccaccggcgc
atggagcgcaagttccagagggaggcgccggaggcctcggtgtccgacgccatgagcttc
tccagctacacgggcagcagcgtcagccggaaactcctcaacactgccaccattagcgtg
ccatactcccaggctactcttcacgccacaaccagaggtaaaaccaagatccagaagaag
cttgagaaaaagaagcagggtgacgggactttcaagatctacgaggacagccgcaagagc
gtccgctctctgtccggcctccagctgggcaacgacgtcatgttcctgaagcagggcacg
tatgtgaacccgcgggaccgcacgcgccgcaacatccgccacatgttcccctccgacaac
gaggacgccatctcccgtgccatcagcgagccggacctgcacggccccgacatcgaccac
tcggaggtcagcaccgactctggccacgactcgctcttcaaccggccaggcctcggcacc
atggtattccgccgcaactacgtcagcggcggcctgttcgacatcggcgtgcgcgacgaa
agcagcctggtggacctggaggaggccacggcggcgttcccccccgccaacctgcgcctg
cgcagccggctgcagcgcccgcccagcgtgggcgaggacagcatcggcagcgcccgcagc
ctgcagcagcgcaacgccgacgacctgccctgggacgagcaggagctgggactggacgac
gacgacgagcccgagagcaacccactggaggtcttcctggccgcccagttcatgaacgag
ttcatgcccatcctgcggagggagaagatcgatctgcaggccctgctgctctgctccgac
gctgacctgaagggcatccacatcccgctggggccccgcaagaagatgatggacgcctgc
aagagacacgtggagaccatcgaggacccggaggctatggtggacacagcactgtga
DBGET
integrated database retrieval system
