Alosa sapidissima (American shad): 121705889
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Entry
121705889 CDS
T11137
Symbol
ngfra
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
asad04010
MAPK signaling pathway
asad04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121705889 (ngfra)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121705889 (ngfra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121705889 (ngfra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
asad04050
]
121705889 (ngfra)
04090 CD molecules [BR:
asad04090
]
121705889 (ngfra)
Cytokine receptors [BR:
asad04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121705889 (ngfra)
CD molecules [BR:
asad04090
]
Proteins
121705889 (ngfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
DUF5850
PFF1_TM
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
121705889
NCBI-ProteinID:
XP_041943136
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All DBs
Position
3:26383311..26421005
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AA seq
364 aa
AA seq
DB search
MGTLSLVLLSGVVVLALGSKLQQAVQEEEDDEECESGQYTRSGECCNQCPPGEGVITPCG
ARQTVCGLCLDSETYSETYSHTEPCKTCTECLGMMRMLTPCTDSNDAMCVCDYGFFLGPM
SGHCEPCTVCPRGEGVLSGCDHHRDTVCEPCLDSSYSQHDSSLDPCLPCTICEDNEVLMR
NCTPEIDAICHDPNAPTYPPTPTFSLLPSDFDPTMPDDSLSPTPGGESTTANPSSPRYIG
HGFNENLIPIYCSILAAVVVGLLAYIIFKRWNSCKQNKQAANNRAATANQTPSPEGEKLH
SDSGISVDSQSLQEQQAAQQAQAQSPGQGPTQSHSQTQMQTHAPEQIVVRMDGAGQPDSP
PAQA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccttgtcgctggtgttgctgagtggagtggtggtgttggcgctgggctctaag
ctgcagcaggctgtccaggaggaggaggacgatgaggagtgtgagtcaggccagtacacc
agatcaggggagtgctgcaatcagtgcccacccggcgagggggtcataacgccctgcgga
gccaggcagaccgtctgcggactgtgcctggacagtgagacctactcagagacgtacagc
cacacagagccttgcaaaacctgcaccgagtgcctgggcatgatgcgcatgctgacgccc
tgcacggactccaacgacgccatgtgcgtctgcgactacggcttcttcctggggccgatg
tcgggtcactgtgagccatgcacggtgtgcccgcgcggcgagggcgtgctgtcgggctgt
gaccaccaccgcgacacagtatgcgagccgtgcctggacagctcgtactcgcaacatgac
agctcgcttgacccctgcctgccctgcaccatctgcgaggacaacgaggtgctgatgcgc
aactgcacgcctgagattgacgccatttgccacgaccccaacgcccccacctaccccccc
acccccacgttttctctccttccctcggatttcgacccgacgatgcccgacgactcgctg
agccccaccccagggggcgagtccaccacggccaaccccagttcgccgcgctacatcggc
cacggcttcaacgagaacctcatccccatctactgctccatcctggccgcggtagtggtg
ggcctgctggcctacatcatcttcaagaggtggaacagctgcaagcagaacaagcaggcg
gccaacaaccgcgccgccacagccaaccagacgccgtcgcccgagggcgagaagctgcac
agcgacagcggcatctccgtggacagccagagcctgcaggagcagcaggcagcccagcag
gcgcaggcgcagagcccagggcagggacccacgcagtcgcactcccagacgcagatgcag
acacacgcgcccgagcagatagtggtgcggatggacggggcaggccagccggactccccc
cctgcacaagcctga
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