Alosa sapidissima (American shad): 121706017
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Entry
121706017 CDS
T11137
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121706017 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121706017 (srebf1)
04131 Membrane trafficking [BR:
asad04131
]
121706017 (srebf1)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
121706017 (srebf1)
Membrane trafficking [BR:
asad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121706017 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
121706017 (srebf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
121706017
NCBI-ProteinID:
XP_041943373
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All DBs
Position
3:complement(25136946..25173383)
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AA seq
1171 aa
AA seq
DB search
MNTLSFDDPSLDHLDPSLSLHDPSDIDTALLNDIDDMLQLINNQDMEFGSLFDHPQFGSG
PPLAPDPPALSLTGAALPAPAPSSAAPSSSTTSTTSSILSSSPHLDALLGPPISRSSTSP
DKLFQPHTFQQSPLAQVAPAPAPTAVRPKQAATLQIQPASAPAPLPAPGPLLVGKTTTYS
PPNPQALFSSPSSPQQQPQPQPQQQQQQQQQQLVYTSQAAYQAVNQGNPAQMATSLSTSP
QSVQSVTIQAQVQNLSSSPMFTTASSTTTQTISQHLQQVPVLLQPQFIKAESLLLTTLKP
DTGTMVTTMATPCTTLTSTTSPIQSTSLQALMSGGTILTTVPLVMDTEKLPINRIAISSK
PGCLPHKGEKRTAHNAIEKRYRSSINDKILELKDLVAGTEAKQLNKSAVLRKAIDYIRYM
QQSNQKLKQENMALKMATQKNKSLKDLVAMEVDGPKMEVKNELPTPPPSEGGSPDNSPFP
HSSSDSEPDSPMVEDSKMERAGAGSAGMLDRARLALCVFTFLFLSFNPLSALLCGADLSS
SSAATGGQGAGRNILGVGQNAESQGWLDWMLPTLLVWMLNGVLVVGVLVRLLVYGEPVTR
PHSGSSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPISQLDQVCAALWAGLR
LCLQRLWVGRWLAGKAGGRLRHDRPLQEDARKSSRDAALVYHRLHQLHMTGKLCGSHLEA
IHMALSAVNLAECAGDCLPVATLAEIYVSAALRVKASLPRVLHFTSRVFLSSARQACLSP
SGSVPPAMQWLCHPLGHRFFVDGDWNVRSSPRESIYSQAGNAVDPLAQVTQAFREHLLEK
ALYCVAQPHGEKPTSEGEGEYSDALEYLQLLTSASDAAGATTQCFAIGSNMATVTGCDPH
SKWWSSVAIVFINWLQGDDAAAERLYPAVEHLPRSLQAAESPLPKAALSVFRAVRTLLAR
PENYQLSLSYCERASGLLRDSLNLGPHCHCNAIDKVVQLLLCDLLLVTRTNVWRALQSQG
APAPASPAASQASPAELHGFQQDLSSLRKLAQTFRPAMRRLFLHEATARLMAGASPTRTH
QLLDRSLRRRTTPGAKTEEECETRPGQREQAEAVMLACRYLPPSFLSAPGQRVGMLADAA
RTLEKLGDKRTLHDCQQMIIKLGSGTTVTST
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaataccttgtcgtttgacgatccctcgctggatcatttggatccaagtctatcactg
catgatcccagtgatattgacacagctcttctgaacgatattgatgatatgcttcagctc
atcaacaaccaggacatggagtttggcagcctgttcgaccacccgcagtttggttcaggg
cccccccttgccccggaccctccggcactgtccctcaccggcgccgctctgccggcccct
gccccctcgtccgcagccccctcctcgtccaccacctccaccacctcctccatcctgagc
agcagcccccacctggacgccctgcttgggccccccatctcgcgcagttccacctcccca
gacaagctcttccagccgcacaccttccagcagtccccgctggcccaggtggccccggca
cctgccccaacagccgtgcgaccaaagcaggcggcaactcttcagatccagcctgccagt
gcgcccgcaccactgcccgctcctggccccttgctcgtggggaagacgacgacctacagt
ccccctaacccccaagccctcttcagttctccctcaagcccccagcaacaaccacaacca
caaccgcagcagcagcagcagcagcagcagcagcagctggtctacactagccaggctgca
taccaagcggtgaaccagggcaacccagctcagatggctactagcctgtccacctcgccc
cagagcgtccagtcagtgaccatccaggcccaggtgcagaacttgtccagctcccccatg
tttaccactgcttccagcacaactacgcagaccatctcccaacacttgcagcaggttcct
gtcctgctgcagccgcagttcatcaaggcagagtctctgctgctcaccaccctcaagccg
gacaccggcaccatggtgaccaccatggccacaccctgcaccaccctcacctccaccacc
tcgccaatccagagcacttcactgcaggccctgatgagtggaggcaccatcctcaccacg
gtcccgctcgtcatggacacagagaagctgcccatcaaccgcatcgccatcagcagcaag
cctggctgtctgccgcacaagggcgagaaacgtacggcacacaacgccatcgagaagcga
taccgctcctccatcaacgacaagatccttgagctcaaagacctggtcgctgggaccgaa
gccaagcagctcaacaagtccgcagtgctgcgcaaggccatcgactacatccgctacatg
cagcagtccaatcagaagctcaagcaggagaacatggctctcaagatggccacccagaag
aacaagtcgctgaaggaccttgtggccatggaggtggatgggccgaagatggaggtcaag
aacgagctgcccacgcctccaccctcggagggcggctcgcccgacaacagccccttcccc
cactccagcagcgactcggagcccgactcccccatggtggaggacagcaagatggagcgt
gctggggcgggcagtgcggggatgctggaccgtgcccgtctggccctgtgtgtcttcacc
ttcctcttcctctccttcaacccactctctgccctgctatgtggggctgacctcagcagc
tcctctgctgccactggcggtcagggcgcgggcaggaacattctgggtgtgggacagaac
gcggagtctcagggctggctggactggatgctgcccaccctgctggtgtggatgctgaat
ggggtgctggtggtcggggtgctggtcagactgctggtgtacggagagcccgtcaccaga
ccccactccggctcctccgtgctcttctggagacaccgcaagcaggctgacctggacctc
gctcggggtgactttgcccaggcctcccagaacctgtggacgtgcctgaaggcactgggc
cgcccgctgcccatctctcagctggaccaggtgtgtgcagcgctgtgggccggcctgagg
ctgtgcctgcagcgtctgtgggtgggccgctggctggccgggaaggctgggggacgcctg
cgtcacgaccgccccctgcaggaggacgcgcgcaagagcagccgtgacgccgccctggtc
taccaccgcctgcaccagctgcacatgactggtaagctgtgcggcagccatctcgaggcc
atccacatggccctgagcgcggtcaacctggcggagtgtgctggagactgcctgcccgtg
gccacgctggccgagatctacgtgtccgctgccctgcgcgtcaaggccagccttcccagg
gtccttcacttcacctcacgagtgttcctgagtagtgcccggcaggcctgtctctccccc
agtggcagtgtccctccagccatgcagtggctctgccaccccctgggccaccgcttcttt
gtggacggggactggaacgtgcgcagctccccccgcgagagcatctacagccaggccgga
aacgcagtggacccactggcccaggtgacccaggccttccgggagcacctgctggagaag
gccctgtactgcgtggctcagccacacggagagaagcccaccagcgagggcgagggtgag
tactctgacgctctggaatacctgcagctgctgaccagtgcttcagatgccgctggagca
acaacgcagtgctttgccatcggctccaatatggctactgttacaggctgtgacccacac
tccaagtggtggtcatctgtggccatcgtgttcattaactggctgcaaggagacgatgca
gcagccgagaggctctacccagccgtggagcacctgccacgcagtctacaggcggccgag
agcccgctgcccaaggcagccctgagcgtgttccgggcagtgcgcaccctgctggccaga
cccgagaactaccagctgagcctgagctactgcgagagagccagcggcctgctgagagat
agcctcaatctggggccccactgccactgcaacgccatagacaaggtggtgcagctgctg
ctgtgtgacctgctgttggtgacgcgcactaacgtgtggcgcgcgctgcagagccagggg
gccccagcaccagcgtcgcctgctgcctcccaggcgtctccggccgagctgcacggcttc
cagcaggacctcagctccctcaggaagcttgcgcagaccttccggcccgccatgcgcagg
ttgttcctgcacgaggctaccgctcgcctgatggccggggcaagccccactcgcacacac
cagctcctggaccggagcctgcgccgccgcaccactcctggagccaagacagaggaggag
tgtgagacacggcctggccagcgggagcaggcggaggcggtcatgttggcgtgccgctat
ctgccgccctccttcctgtcggcgccagggcagcgcgtgggcatgttggccgacgccgcc
cgcacgctggagaagctcggggacaagcgcaccctccacgactgccagcagatgatcatc
aaactgggcagtggcaccaccgtcacgtccacctaa
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