Alosa sapidissima (American shad): 121706033
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Entry
121706033 CDS
T11137
Symbol
snrnp70
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121706033 (snrnp70)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121706033 (snrnp70)
Spliceosome [BR:
asad03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121706033 (snrnp70)
Complex B
121706033 (snrnp70)
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
121706033
NCBI-ProteinID:
XP_041943410
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Position
3:complement(25250986..25260595)
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AA seq
506 aa
AA seq
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MTQFLPPNLLALFAPRDPIPFLPQLEKLPHEKHHNQPYCGIAPFIQHFEDPRDAPPPTRA
ETRDERLERKRREKIERRQTVVEDELKLWDPHNDPNAQGDAFKTLFVARINYDTTESKLR
REFEVYGPIKRIYIVYNKRTSKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWHPRRLGGGLGGTRRGGADVNIKHSGRDDTSRYDDRPIGGDRDRDRERRERSRE
REPRGGGGGGGGAPVEKERERRRSRSRERRRRSRSRERERAVPEEGRRRERERERGGGAG
AAPDTRSRERSRDRGERKRRSRSRDRKRDRERGKGAEGGEEGPGMEGMMGDGGERGMDEM
GGGDMGRGEEPGMEGEEGRGGGRDRDRERGDRDRDRRRSHRDKDRDRDRERRRGDRDRDR
EHKRERGDRERGSDRGREDRHSMLPSGDMEGLGNGGEEGGDSMPPRSEEGSQDGMRMMMD
QESMQSGEDYGSNENGYKMEAQADEY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtttcttccccccaacctattggctttgtttgccccccgagaccccattccg
tttctgccccagttggagaagcttcctcatgagaaacaccacaaccagccatactgtgga
atcgcgccattcatccaacactttgaggaccccagggatgctccgccacccaccagagcc
gaaactagagatgagcgattagaaagaaaaagacgagaaaagattgagagaagacagact
gttgttgaagacgagctgaagttgtgggatcctcacaatgacccaaatgcacaaggggat
gccttcaagacactgtttgtggcacgaattaactatgataccacagaatccaagctgaga
agagaatttgaggtctatggacccatcaaaaggatttacatagtctacaacaagaggacg
tcaaagccccgtggatacgccttcatcgagtatgaacacgagagggacatgcactctgcc
tacaagcacgctgatggcaagaagatcgacggcagaagggtgctcgtggacgtggagaga
ggtcgcacagtgaaaggctggcatccacgtagacttggtggtggcctgggtggaactaga
aggggtggggcagatgtcaacattaagcactctgggagggatgacacctcacgctatgat
gaccgaccgatcggaggcgatcgggaccgtgaccgggagcgacgagaaagaagccgtgaa
cgtgagccgcgtggtggcggtggcggcggcggtggcgcacccgtcgagaaggagcgcgag
cgccgccgctcccgttccagagaacggcggcgccgctcccgctcccgggagagagagcgg
gccgtgccagaggaagggaggcggagggaaagagagagggagcgcggaggtggcgcagga
gcggccccagacacccgcagccgagagcgcagtcgagaccgcggcgagcgcaagaggagg
agcaggagcagggacaggaagagggacagggagagggggaagggagcggagggaggtgaa
gagggccccggcatggaaggcatgatgggagatggaggagagcgtgggatggacgagatg
ggtggtggcgacatgggccgtggggaggagccagggatggagggagaggaagggagagga
ggaggcagagacagggatagagagaggggggatagagaccgagacagacggaggagtcac
cgggacaaggacagggatagggaccgtgagaggaggaggggggacagagacagggaccgc
gagcacaagagagagcggggtgaccgcgagcggggtagtgaccgtgggagggaggatcgt
cactctatgctgccctctggtgatatggagggactgggcaacggaggtgaggagggtggc
gactccatgccgccccggtctgaggagggctcgcaggatggcatgcggatgatgatggac
caggagtccatgcagtctggcgaagactacggctccaacgagaacggctataaaatggag
gcccaggccgatgaatactga
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