Alosa sapidissima (American shad): 121706066
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Entry
121706066 CDS
T11137
Symbol
mcoln1b
Name
(RefSeq) mucolipin-1b
KO
K04992
mucolipin 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04020
Calcium signaling pathway
asad04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121706066 (mcoln1b)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121706066 (mcoln1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121706066 (mcoln1b)
Ion channels [BR:
asad04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121706066 (mcoln1b)
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Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
Reticulon
Motif
Other DBs
NCBI-GeneID:
121706066
NCBI-ProteinID:
XP_041943446
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Position
3:19087368..19096261
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AA seq
579 aa
AA seq
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MAMASSDYSRSTPDGNVTEKDKLLSPVVSYGSSECKGCAQTDRRPADLEGSLLQQQLEHE
EEELRRKMKYFFMSPCDKYHAKGRKPYKLLLQILKIVIVTVQLVMFGLSNQMVVNFKDEN
TEAFRYLFLKDYQDDPDSTLAVYTQSDVYSHIHYAIDQYLALADTSIGCYAYVPGVGVNG
SALTLCQHYYKKGHINPVNDTFDIDPRIVTDCIGVDPPPEPTAPLTDDYKNFTLQFHKLI
NVTMNFQLKAINLQTIINNEIPDCYTFRIMILLDNHAHSGRVKISLENQASIQECRDPNV
SGQADSNARVAFDVTVAVVCLLSLVLCGRSILRGVLLQNEFVQFFKHRLRRKVCWGDRME
FINGWYILLIVSDVFTIIGSFIKIGIESKGNSFYDLCGILLGTSTLLVWVGVIRYLSFFQ
KYNILIVTLRAAFPNVIRFCCCAAAIYMGYCFCGWIVLGPYHAKFRSLSMVSECLFSLIN
GDDMFATFSELEHSSTLVWVFSQVYLYTFISLFIYMVLSLFIALITGAYDSIMQQTQTQD
PSHVTELHAFIAQCTDTPCSGNFRGSEPKSCSLFCCFDQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcatcttcggactacagtcgtagcacccccgacggtaacgttacagagaaa
gataaactgctaagccccgtagtgagctatggctcaagtgagtgcaagggatgtgctcag
actgaccgtagaccagctgacctcgaggggtcgctgctgcagcaacagcttgaacatgaa
gaagaagagcttcgaagaaagatgaagtacttcttcatgagtccgtgtgacaaataccat
gccaagggccgtaaaccatacaagctgctcctgcagatcctcaagatcgtcattgtcact
gtgcagctggtgatgtttggtctgagtaatcagatggtggtgaactttaaggatgagaac
acagaagctttcaggtacctcttcctgaaagactaccaggatgaccctgactccactctg
gcagtgtacacccagagtgatgtctacagccacatccattatgccatagaccagtacctg
gctttggcagacacctccattggctgctatgcgtatgtgccaggtgtgggtgtgaatggc
agtgccctaaccctttgtcagcactactacaagaagggacacatcaatcctgtcaatgac
acatttgatattgatccacgaattgtgactgactgcataggagtggacccccctccagag
cccactgctccacttactgatgactataaaaacttcacccttcaatttcacaagctgatt
aatgtaaccatgaacttccagctaaaggccatcaacctgcaaactataataaacaacgag
atcccagactgctacaccttccgcatcatgatcctgctggacaaccatgctcatagtggg
agggtcaagattagcctcgagaaccaggcctccatccaggaatgtcgggatccaaatgtc
tctggacaggcggatagcaacgcgcgcgtggcgtttgatgtgactgttgcggtcgtgtgt
ttgctctccctggtgctctgtggccggtccattctcagaggcgtgcttctgcaaaatgag
tttgtgcagttcttcaaacacaggttaaggcgtaaggtgtgctggggggacaggatggag
ttcattaatggatggtacatcctactcatcgtcagtgatgtgtttaccattattgggagc
ttcatcaagattggtattgagtccaagggcaattcattctacgacctgtgtggaatttta
cttggcacatcaactctgctggtgtgggtcggtgtcattcgatacctcagcttcttccag
aaatacaacattctcattgtgacgctgcgggctgcgttccccaatgtgattcgcttctgt
tgctgtgctgcggccatctacatgggctactgcttctgtggctggatagtgctcggacca
taccatgccaagtttcggtcactgtccatggtgtcggagtgcctgttctccctgatcaac
ggggatgacatgttcgccacattctcggagctggagcacagcagcaccctggtgtgggtc
ttcagccaggtctacctgtacaccttcatctcactcttcatctacatggtgctgtcgctg
ttcatcgccctcatcaccggagcctacgacagcatcatgcaacaaacccaaacccaggat
ccatcacacgtcacagaactgcatgccttcatagcacagtgcactgacacaccctgctct
gggaatttccgtggatcggagcccaaatcctgctctcttttctgctgctttgaccagtga
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