Alosa sapidissima (American shad): 121706071
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Entry
121706071 CDS
T11137
Symbol
itga2b
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-IIb
KO
K06476
integrin alpha 2B
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04510
Focal adhesion
asad04512
ECM-receptor interaction
asad04810
Regulation of actin cytoskeleton
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121706071 (itga2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121706071 (itga2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121706071 (itga2b)
04810 Regulation of actin cytoskeleton
121706071 (itga2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121706071 (itga2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121706071 (itga2b)
04515 Cell adhesion molecules [BR:
asad04515
]
121706071 (itga2b)
04090 CD molecules [BR:
asad04090
]
121706071 (itga2b)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121706071 (itga2b)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121706071 (itga2b)
Cell adhesion molecules [BR:
asad04515
]
Integrins
Integrin alpha subunits
121706071 (itga2b)
CD molecules [BR:
asad04090
]
Proteins
121706071 (itga2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
FG-GAP_2
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
121706071
NCBI-ProteinID:
XP_041943453
LinkDB
All DBs
Position
3:complement(12702547..12729829)
Genome browser
AA seq
1053 aa
AA seq
DB search
MMGERRCLPGVVHMRLLLLIIAPGVHQALNINQNNVTVYSGPEGSYFGFSVDFMQTTGQG
VSLVVGAPLDNSTQTNVEEGGSVYRCPWSANGGTCQKIEFDPKGNEEYRVADFTLKGSKS
HQWFGASVRAMDQYILACAPLFHWNVLNSYNDSQNTPVGNCFLKDVTTGLVSAYSPCRDT
YVEFHYKNNRYVNDKRYCEAGFSVDITRNGTVVIGAPGSLYFRGQVFAATLDELTDTTRR
PRTSYLPSKGVGQEINFDPFQDSDTYSGYSVTTGYLTGASIQDYLVGYPNDRDTSGTVRI
YNGRXVNSKKKFFGTQVAAYFGHAVAVTDINSDGREDILIGAPLYIEQLANQQQREVGQV
YVYLQQVRSKFNDRPEQTLTGSLPYGRFGVSIAPLGDLDNDGYNDVAVGAPSSDGNGRVF
IYMGQSEGLSPQPTQVLESPFPSPRTPSSFGFTLRGDTDVDDNGYPDLIVGAWGVSKIAV
YRTLAVVKAKGQLALFPDVLNPEEKTCSLPSTKKAVTCFTVMMCISVSGHRIPQTLALSV
ELQLDKMKQALTRRTLLLHNSQPQERVTRTVQTAQTNNCFNVTAYLRAETEFKDKLSPIF
ISVSYTLINTQDAILQGQTSAMDQTRIILDCGPDNICIPDLKLTAIAETPRLLIGDDNPA
LLVVEAENRGEGAYETELHISLPSSTHFQGLAPDREGFSRLNCANRKDNGTVIVVCDLGN
PMPAGQKLKAGLLFSVGNLKEVERDVTFHMQIRSKNSHNPDSDPVFLKINVMASATLEMQ
GASSPLEVVLPIAKWEPVKQPASLEQVGPYVEHVYMLRNLGPSAVNVRAVMEFPTHRQGA
TLLYAFATDSENFLSCSTNASVDPDRLVRTESTVNRTSQEGHHINKREALTNIPQNPQAQ
KPRETIHVNCSSGDPCVRVECEVRGLRRQGIAVVKVMARLWVNTFERPNENYILQSSAFY
HVVGMPSKIQPQELPSGQAETHTSVVWREEMREMPVWWIVVAIAAGLLLLALLSYIFWKV
GFFKRNRPPCEDEDDDTQNLSAEQTEYANVKSS
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgatgggggagagaaggtgtctgcctggggtggttcacatgcggctgctcctcctaatc
atcgcacctggtgtgcaccaagcactgaacatcaaccagaacaacgtgaccgtctacagc
gggccagagggcagctactttggcttttctgtggatttcatgcagaccacaggtcaaggc
gtaagcctagtagtgggggctccgctggataactcaacccagacaaatgtggaagagggg
ggatcagtgtatcgctgtccctggtcagcaaacggggggacatgccaaaaaatagagttt
gatccaaagggtaatgaagagtacagagtggctgatttcacactgaaggggtctaaatcg
catcagtggtttggggcgagtgtgcgtgccatggaccaatacatcctggcctgtgcccca
ctattccactggaatgtcctcaacagctataacgactcccaaaatactccagtggggaac
tgctttctgaaggacgttacaactggcctagtttccgcctactccccctgcagggataca
tatgtggagttccactacaagaacaacagatatgtgaatgacaagcgctactgtgaggct
gggtttagtgttgacatcacacggaatggaacagttgtgattggtgccccaggaagtctg
tactttcgaggtcaggtcttcgcggcaaccctagacgaactaacagacacgacgagacga
cccagaacttcctacctcccatcaaagggtgtcgggcaagaaattaactttgaccctttt
caggattccgacacatacagtggttattctgttaccactggatatctcacaggggccagc
attcaagattatttggttggttaccctaatgatcgtgacacatctggaacagtcagaatc
tacaatggaaggnncgtgaactcaaaaaaaaagttctttggaactcaggtggcagcctat
ttcggtcatgctgttgcggtgactgacatcaacagcgacgggagagaggacatcctgatc
ggggcacctctctacatcgagcagctagccaatcaacagcagcgggaggtgggccaggtg
tatgtctacctgcagcaggtccgctccaagtttaatgaccgcccggaacagacgctgaca
ggctctttgccctacggacgctttggagtgtctattgccccgctgggagacctggacaac
gatggctacaatgatgtagctgtgggggctccatcgtctgatggaaatggccgtgtgttc
atctacatggggcagagtgagggtctctcccctcagcctacccaggtcctggagagcccc
ttcccctccccacgcaccccctcttccttcggcttcaccctcaggggggacactgatgtg
gacgacaatggatacccagatcttatagttggtgcatggggtgtcagtaaaatagcggtt
tacagaactcttgccgttgtgaaggccaaaggccagcttgccctctttcctgacgtgcta
aacccagaggagaagacctgttcactccccagcactaagaaggcagttacctgtttcact
gtcatgatgtgtatcagtgtctctgggcatcgtatcccccaaactctggcattgagtgtg
gagctacagctggataagatgaagcaggctctcacccgcaggactctgcttctccacaat
agccagccgcaggagagagtcacgcgcacagtccagaccgcacagaccaacaactgcttc
aatgtgaccgcctatttgcgggcagagacagagtttaaggacaagctcagtcctatcttc
atttcggtcagctacacactgatcaacacgcaggatgccattcttcagggccagacctcc
gccatggaccagacacgcatcatccttgactgtggtcctgacaacatctgtatcccagac
ctgaagctgactgctattgccgagacgccccgcctgctgatcggagacgacaacccggcg
ctgctggtggtggaggcagagaaccggggcgagggggcgtacgagacagagctgcatatc
agtctgcccagcagcacacacttccagggcctggccccagacagagagggcttcagcaga
ctgaactgtgcaaataggaaagacaatggcactgtgatagtggtgtgtgacctgggaaac
cccatgccagctggccagaagctgaaggcaggactgctcttcagtgtaggaaacctgaag
gaggtggagagagatgtcaccttccacatgcagatcagaagtaagaacagtcataacccg
gatagtgaccctgtctttctaaagatcaatgtgatggcctcagcaacactagagatgcaa
ggagcctcctcacccttggaggttgtcctgcccatcgctaagtgggagccagtgaagcag
ccagcctctttggagcaagtggggccgtacgtggagcatgtctacatgctccggaaccta
ggtcccagtgcagtgaacgtgagggcagtgatggagttccccacacatcgtcagggtgct
accttgctctacgcctttgccaccgactctgaaaactttttgtcctgttctaccaacgcc
agtgtggaccccgacaggctggtgagaacggagtccacagtgaacagaaccagtcaggag
ggccaccacatcaataaaagggaagccctgacaaacattccccaaaaccctcaagcacag
aagcccagagaaaccatccatgtgaactgctcctctggggatccatgtgtgagggtggag
tgtgaggtgagggggttgaggaggcagggcatcgccgtggtgaaggtcatggcccgtctc
tgggtcaacacgtttgagaggccgaatgaaaactacatcctgcagtccagtgccttctac
catgtggtggggatgccctctaagatccagccccaggagctccccagcggccaggcagag
actcacaccagtgttgtttggagagaagagatgagggagatgccggtgtggtggatcgtc
gtggccattgctgctggactcctgctactggctctgctcagctacatattctggaaggtg
ggcttctttaagcgcaaccggcctccatgtgaggatgaggatgatgacacacaaaatctc
agtgctgagcagacagagtatgctaatgtgaagtcatcctag
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