Alosa sapidissima (American shad): 121706082
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Entry
121706082 CDS
T11137
Symbol
samd1a
Name
(RefSeq) sterile alpha motif domain containing 1a isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121706082 (samd1a)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
121706082 (samd1a)
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Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_PNT
SAM_2
Motif
Other DBs
NCBI-GeneID:
121706082
NCBI-ProteinID:
XP_041943466
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All DBs
Position
3:2562395..2567715
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AA seq
440 aa
AA seq
DB search
MSEPSYRDWILETIDSLRSRKARPDLERICRMVRRRHGSEPDRTCKELEKLIQEQTVLKV
NYKGSISYRNAAKVQRNRKKLSQVTNRSVVKQPALPDSSNDDSVLGPTEDEMGDMEVMHG
SQFHDSTLDTTVDSTDIGEDTTVSLVSETTIFTLTQGSVSMAVELNNALTQDGTDNTQDE
CGNTGSCSGHGNEMGICAHVSFLPHPLGPSCNGHWPSDRPSLGKCSPSLAPLKHEGYEGN
AYQAEPLPTGSLRETGVLELGSQPLALCPSVQRYALKREEGMRAVESAATPDQLGSKCSH
TQDEAMQVSKGHSQMCSYGSENGKESTKGMKVTVTSTLEQDAFVKDTEQSREVSEGSGEI
GTDPMQWTVADVASYFTTAGFPEQALVFRTQEIDGRALLLMQRSDVLTGLSIRLGPALKI
YERHVKMLQRRVFQDDGDLS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccatcgtatcgcgactggatacttgagacgatagactctttacggtcaaga
aaagcgagaccagatcttgaaagaatttgtaggatggtacgaagacgacacgggtccgag
ccagatcgaacctgtaaagaattggagaaactgatccaagaacaaacggtccttaaagtt
aactacaaaggctcgatttcttatcgaaatgctgcaaaggttcaaagaaatcgaaaaaaa
ctgagtcaggtgacaaatagatcagtggtaaaacaaccagcgctcccagattcgagcaac
gacgacagtgttctcggtcccacggaggatgagatgggggatatggaagtaatgcatggc
agccagtttcacgactctacgcttgacacaacagtagattctaccgacattggcgaggat
acaactgtgagtttagtgtctgaaacgaccattttcacactgacacaggggagcgtgtcc
atggccgtggaactgaataacgctctgacacaggatggcacagacaacacacaggatgag
tgtggcaacactgggtcctgctctgggcatggaaatgagatgggcatctgtgcccatgtc
agttttcttcctcaccccctgggcccatcatgcaatggccactggccttcagacaggccc
agcctgggcaaatgttctcctagcctggccccactaaaacatgagggatatgagggcaat
gcctaccaagcagagcccctaccaactggatcgctccgggagacaggagtgttggagttg
gggagccagcctcttgctctctgcccgtctgttcagaggtacgctctgaagagagaagaa
gggatgagggcagtagagagtgcggccacaccggatcagctggggtcaaagtgcagccac
acgcaggatgaagcaatgcaggtctctaaaggacattctcaaatgtgttcctatggctca
gagaatggtaaggagagtacgaaggggatgaaggtgactgtgacctccactctggaacaa
gatgcattcgtcaaggatacagagcagagcagagaagtctcagagggcagcggggagatt
ggtacggatccgatgcagtggactgtggcagatgttgccagttatttcaccacagcaggg
ttccctgaacaggcgttggtgttcagaacccaggaaattgatggccgggctcttctcctg
atgcagcgcagtgatgtgctgaccggcctgtccattaggcttgggcctgccctcaagatt
tacgagcggcacgtgaagatgctgcagaggagggtcttccaggacgacggtgacctcagc
tga
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