Alosa sapidissima (American shad): 121706213
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Entry
121706213 CDS
T11137
Name
(RefSeq) TANK-binding kinase 1-binding protein 1-like isoform X1
KO
K12652
TANK-binding kinase 1-binding protein
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121706213
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Gene cluster
GFIT
Motif
Pfam:
TBD
Fib_alpha
Zn-C2H2_12
HOOK
CENP-F_leu_zip
Mis12
FTA4
DUF4200
Rad50_zn_hook
PKcGMP_CC
Lysozyme_like
Knl1_RWD_C
FapA
zf-C4pol
Prefoldin
Motif
Other DBs
NCBI-GeneID:
121706213
NCBI-ProteinID:
XP_041943679
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Position
3:4594221..4613709
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AA seq
615 aa
AA seq
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MDSLFSSELSLLGSVEGLREDGCGMGWSSSPLSEDMYPTSHFALAAAYHDIKTRLASLER
ENISIKHKLRNYEVKFPMISEFGEERSPCCSCEPKESSLMMSDSSSLQQKINSLTQELQK
SKEREERLEDVIQAYEKIHLEKSNVQRDLDKMTSLAEQHVERIHGLEAALRQRDDSLQKL
GSRVRSGKDSPQTQPHVRAKDMHHLQLHTSLDVPHECRGPTLQSSRSLDALSDLKVQRLE
AELEGARHEAQGACQREEELKAELERLQEEIRQLQSQRQEMPTTCEHCDVEWIKKAGDEQ
VNLALAYTELTEELGRVRSLAAKQSEIFRQTAQEQQSPVLRHSPASQRCSPSSQRPSPSP
DRLRPSPPISPTAGPASYTSRPPTSRLRERFQGRRSYSEMSDPSSHGRPPSHARLLCDPV
STLPKPHVMGGAGGYQRLPRASLAGTRPASAHGGSLGGGMGGSLGGSPARHHRGLELDLE
LAFPLMEMRHLCRLEDPSVVASLAPAPLVTPPQSSDEEEDWHCPSPVHSPPRTLGAVLPP
CPPFPAPEGPSTLTCHLQGHLLADHAQSWPSINLWMETEENRARSCPLCQLTFPTDYPDD
ALIKHIDTHLENSKI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggactctttgttcagcagtgagctgagtctcctgggcagtgtggagggtttgcgggag
gacggctgtgggatgggctggtccagctcgccgctctctgaagacatgtaccccacatcg
cacttcgccctggctgccgcctaccacgacatcaagacccggctggccagcttggagcgc
gagaacatcagcatcaagcacaagctcaggaattacgaggtcaagttccccatgatcagt
gagtttggggaggagcggagcccctgttgctcctgtgagcccaaagagtccagcctcatg
atgagtgatagcagcagcctgcagcagaaaatcaactccctcacacaggagcttcagaag
agcaaggagcgggaggagaggctggaggatgtcatccaggcgtatgagaagatccacctg
gaaaagagcaacgtgcaaagggacctggacaagatgacctctctggcggagcagcatgtg
gagcgtatccacggtctggaggcggccctaagacagagggacgactcgctgcagaagctc
ggctcccgtgtgcgcagcggcaaagactctccacagacacagccgcatgtgcgcgccaaa
gacatgcaccacctacagctgcacaccagcctggacgtgcctcatgagtgccgtgggccg
actctgcagagctcccgcagcctggacgctctgtctgaccttaaagtgcagaggctggag
gcggagctagagggggccaggcacgaggcccagggggcgtgtcagagggaagaggagctg
aaggcggagctagagcggcttcaggaagagatccggcaactacagagtcagagacaggaa
atgccaacgacctgtgaacactgtgatgtagagtggatcaagaaagcaggagatgaacaa
gtgaatctggctctggcctacactgagctcactgaggagctgggccgagttcgctctctg
gctgccaaacagagtgagatctttaggcaaactgcccaagaacagcaaagcccagtcttg
cgtcactctcctgcatcccagcgctgctcgccctcgtcccagcggccgtccccctccccc
gaccgcttgcgcccctcaccccccatctcccccacggcgggccccgcctcctacaccagc
cgcccgcccaccagccggctgcgcgagcgcttccagggtcgtcgtagctactccgagatg
tccgacccctcgtctcacggccgcccgcccagccacgcccgcctgctgtgcgacccagtg
tccaccctccccaagccgcacgtcatgggcggggcggggggttaccagcggctgcccagg
gcatctctggccggtaccaggcccgcgtccgcccacgggggcagccttggcggcggcatg
gggggcagtctggggggcagcccggcgcgtcaccaccgcggcctggagctggatctggag
ctggcgttcccgctgatggagatgcggcacctgtgccgcctggaggacccctccgtggtg
gcctcgctggcgcccgcgccgctggtcacaccgccgcagtcctcggacgaggaggaggac
tggcactgcccatcgcccgtgcacagcccaccgagaacgctgggcgctgtcctgcccccg
tgcccgccattccccgcgccggagggacccagcaccctcacctgccacctgcaggggcat
ctccttgccgaccatgcccagtcatggccctccatcaatctgtggatggagacggaggag
aacagagcccgcagctgcccgctgtgccagctgactttccccaccgactacccggatgat
gcgctcatcaaacacatcgacacacacctggagaacagcaagatctga
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