Alosa sapidissima (American shad): 121706226
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Entry
121706226 CDS
T11137
Symbol
rrn3
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121706226 (rrn3)
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
121706226 (rrn3)
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GFIT
Motif
Pfam:
RRN3
Syntaxin-5_N
Motif
Other DBs
NCBI-GeneID:
121706226
NCBI-ProteinID:
XP_041943706
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Position
3:complement(6151060..6163395)
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AA seq
613 aa
AA seq
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MEVDGREFLNTPPMKTVRFGDYVANTLAKFKKGDKGDYELLKHQLTDPDIKDAQIINWLQ
EFRACVTQLNKDHEQLIYVVLRLPWLGRSQAVVDEYLSFLSNLVSAQTVYLRTCLKIVVS
NFTPARVRIREGDVDISDSDDDDENLPRNFEHCHQALQIISRYVPSTSRFLMPILTDHFP
FVQKSSRTLECYVHNLLRITVYIPTLRRDMLELLISKMLTLDVSASRVEIEDMEENAVQK
SDEASQDECLFDMDEDTDSGLAPTPPDCTAMAHPVAERLDTLMGVLLAFIKDVCHQNAVL
ELERTKALYRDLLAVFDKLILPTHASCHVQYCVFYLCSFRLGLAEAFLDHLWKQLQSPSQ
PSVLRQAAAGYMGSFLARAKFLPVPTVRACLDLLVPWLHLYIDSQDASSRSFCDVTLHGP
FYAACQAIFYTLVFRHRALVEGNMKKGLAYLQSLNLERIVMCQLNPLKVCLPAITNMFAA
ITRKYQLVFCYTIIERNNRSTLPVIRSSVGGNSVSANTNPLDSFFPFDPYLLKRSGKLIE
PLYQVWEEPSDCMVDAPKKDIRKASVEEEDDFLQGETPQMDTVMGMTPGSFEAHLRSPSS
VGSPPLAFLQRPF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggacggtcgggaattcctcaacactcctccaatgaaaacagtgcgcttcggc
gattatgttgccaacacgttggctaaatttaaaaagggtgacaaaggagattacgaacta
ctcaagcatcaattgacagaccctgacataaaagacgctcagataataaattggctacaa
gaattcagggcgtgtgtcactcagttaaacaaagaccacgagcaacttatctacgttgtc
ttgcgacttccttggctgggacggagtcaagctgttgtggatgaatatctgtctttcctg
agcaaccttgtatctgcccaaactgtgtacctcaggacttgtctcaaaatagtcgtctcc
aattttacgcctgcaagggtgcgaatccgggagggcgatgtggatatttctgattcagat
gatgatgatgaaaacctccctaggaactttgagcactgtcatcaagccttgcaaattatt
tcaagatatgttccatcaacaagtagattcttgatgccaattctcactgatcacttccct
tttgttcagaagtcttcaagaactcttgagtgttacgttcataacctactaagaatcaca
gtgtacatcccaactctgcgacgagatatgctggaactcctcatcagtaaaatgctgaca
ctggatgtgagtgcgtcccgtgttgaaattgaggacatggaagagaacgctgtacagaag
agcgacgaagcatcgcaggacgagtgcctgtttgatatggatgaggacacagattcgggt
ctggcccccacccctccagactgcacagcgatggcccaccctgtggcagagcgcctggac
acactgatgggggtcctgctggccttcattaaggacgtgtgccaccagaatgctgtgctg
gagctggagagaaccaaagcgctgtaccgggacctgctggctgtgtttgacaagctgatt
ctgcccacgcacgcctcctgccacgtgcagtactgcgtcttctacctctgcagcttccgc
ctggggctggctgaagcatttctagaccacctatggaaacagctgcagagcccatcccag
ccgtctgtgttgagacaggcagccgccggctacatgggcagcttcctggcacgtgccaaa
ttcctgcccgtacccacggtgagagcgtgtctggacctgctggtgccatggctacatctc
tacatcgacagccaggacgcaagctcgcgctccttctgtgatgtgacgctccacgggccc
ttctacgccgcctgccaggccatcttctacacgctggtgttcaggcacagggcgctcgtg
gagggcaacatgaagaaagggctggcgtatctacagagcctgaatctggaacgtatcgtc
atgtgccagttaaacccgctcaaggtctgcctgcctgccatcaccaacatgttcgctgcc
attaccaggaagtaccagctcgtcttttgttacaccatcatcgagcgtaacaaccgcagc
acactgcctgtcatccggagctcagtggggggaaactcagtgtcggccaacaccaaccct
ctggacagcttcttcccctttgacccctacctgctcaagaggtcagggaagctgattgag
cctctatatcaggtgtgggaagagccctccgactgcatggtggatgccccaaagaaggat
atcagaaaagcctcggtggaggaggaggatgacttcctgcaaggcgagaccccgcagatg
gacacggtcatgggcatgacccccggctccttcgaggcgcacctccgcagccccagcagc
gtgggctcccccccgctcgccttcctgcaacggcccttctga
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