Alosa sapidissima (American shad): 121706405
Help
Entry
121706405 CDS
T11137
Symbol
yod1
Name
(RefSeq) ubiquitin thioesterase OTU1
KO
K13719
ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121706405 (yod1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121706405 (yod1)
Peptidases and inhibitors [BR:
asad01002
]
Cysteine peptidases
Family C88
121706405 (yod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_OTU1_C
OTU1_UBXL
OTU
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
121706405
NCBI-ProteinID:
XP_041944053
LinkDB
All DBs
Position
4:complement(17246544..17250365)
Genome browser
AA seq
308 aa
AA seq
DB search
MLRLRCKAKNGTHLMQGLTHQSCVQELKHKVEELTGIPCEVQKIMVGYPPSSLDFRDGDA
TLKDYPIKSGDTLIVEEEKNKPKPQTTPTPAAPTNVPKGPSLDNTGPTLERRVVPADNSC
LFTSVHYVVEGGVYEPTCAPEMRGLIAQIVASDPTAYSEAVLGKTNDEYCTWIRREDTWG
GAIEVSILSKFYQCEICVVDTQTVRVDRFGEDAGYQKRVMLIYDGIHYDPLQKVAAGSDT
PPQTVFSTTDDVTLAQALELADEARRKRQFTDVNRFALRCMVCQMGLVGQKEARQHAKET
GHTNFGEV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctgcgttgcaaggccaaaaatgggacccatctaatgcagggcctcacacac
caatcctgtgtccaggagctgaaacacaaggtagaggagcttaccgggatcccgtgtgaa
gtccagaaaatcatggtgggctatcctccctctagccttgactttcgcgatggagatgcc
accctcaaggactaccccatcaaatcaggagacacgctcattgtggaggaggagaagaac
aagcccaagccccagacgacacccacgcctgcggcgcccaccaatgtgcccaaggggccc
tccctggacaacaccgggccaacgctagagcggcgggtggtgccggccgacaactcctgc
ttgttcaccagtgtgcactacgtggtggagggcggcgtgtatgagccgacgtgcgccccc
gagatgcgcggcctcattgcccagatcgtggccagcgatcccactgcctactcggaggcc
gtgctgggcaagaccaacgacgaatactgcacctggatccggcgcgaagacacctggggc
ggcgccatcgaggtgtccatcctctccaaattctaccagtgcgagatctgcgtggtggac
acgcagacggtgcgtgtggaccggttcggcgaggacgccggttaccagaagcgcgtgatg
ctcatctacgacggcatccactacgacccgttgcagaaggtggcggcgggctcggacacg
ccgccccagacggtgttctccacaacggacgacgtgacactggcacaggccctggagctg
gcggacgaggcacggcgcaagcgccagttcacggacgtaaaccgcttcgcgctgcgctgc
atggtgtgccagatgggcctggtgggacagaaggaggcgcggcagcacgccaaggagacc
ggccacaccaactttggggaagtgtga
DBGET
integrated database retrieval system
