Alosa sapidissima (American shad): 121706418
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Entry
121706418 CDS
T11137
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121706418 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121706418 (lrrn1)
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_1
ig
V-set
Ig_2
LRR_EndoS
LRR_Zer-1
fn3
Pur_ac_phosph_N
LRRCT
Peptidase_M73
Ig_6
Ig_5
Sp38
Ig_C17orf99
LRR_NXF1-5
Fn3_ELFN
LRRNT
Motif
Other DBs
NCBI-GeneID:
121706418
NCBI-ProteinID:
XP_041944092
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All DBs
Position
4:10017029..10028518
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AA seq
717 aa
AA seq
DB search
MARGTFNLSGLGWVCCVLLLTPFGLSSVQGTECPQLCVCEIRPWFTPQSTYREAITVDCN
DLRLTRIPGNLSSDTQVLLLQSNYISRTSEELEQLYNLTELDLSQNNFSNIRDVGLTNMS
QLTTLHLEENQIVEMPDFCLQDLTNLQELYINHNQITTISPSAFSGLHNLLRLHLNSNKL
KAIDSRWFESTPNLEILMIGENPVIGILDMNFKPLVNLRSLVLAGMDLTDVPGNAFVGLG
NLESLSFYDNKLVRVPQNALQKLPNLKFLDLNKNPVHKIQEGDFKNMLRLKELGINNMAE
LVSIDRYALDYLPELTKLEATNNPKFSYVNRQAFRDVPSLESLMLNNNALNSLYQATVES
LPNLREISIHSNPLRCDCVIQWMTSNKTSIRFMEPLSMFCAMPPEFRGQHVREVLLHDSP
EQCLPMMSHDTFPNHLNLDIGMTVDLDCRAMAEPEPEIYWVTPLGNKVMMDTVSEKYRLN
NQGTLRISNIQVEDSGHYTCVAQNVEGKDTRVTALRVNGTLIDSTQLMKIYVKHTESHSI
LVSWKVNSNVMTSNLKWSSATMKIDNPHITYTAKVPVDVHEYNLTHLQPATEYEVCLSVS
NIHQQTQKSCVNVTTKHATFAVAISDQGTSTALAAVMGTMLAIISLASIAVYIAKRWKRK
NYHHSLKKYMQKTSSIPLNELYPPLINLWDADNDKDKDGSSENKPTQVDTTRSYYMW
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctagagggactttcaacctttctggactgggctgggtttgctgtgtgttgctgctg
acgccatttggactctcctctgtccagggtacagagtgtcctcaactgtgcgtgtgcgaa
atccgcccttggttcaccccgcagtccacctaccgagaagccatcaccgtcgactgcaat
gaccttcggctgactcggatccctggcaacctgtccagtgacacacaggttctcctactg
cagagtaactacatctcccggaccagtgaggagctggagcagctctacaacctgactgag
ctggacctctcccagaacaacttcagcaacatccgggatgtgggtctcaccaacatgtcc
cagctcaccacgctccacctggaggagaaccagattgtggagatgcctgatttctgcctg
caggacctgacgaacctgcaagagctctacatcaaccacaaccagatcaccaccatctcg
ccgagtgctttctcagggctgcacaacctgcttaggctccatctcaactccaataagctc
aaggccatcgacagccgctggtttgagtccacacccaacctggaaatcctgatgattgga
gagaatccagtcattggcattctggatatgaactttaagccccttgttaacttgcggagc
ttggtgcttgcagggatggatttgactgatgttccaggaaatgcctttgttggtttggga
aacttggaaagtctttcattttatgacaataaacttgtccgggtacctcaaaatgctctt
cagaaactccccaatttgaagtttttggacttaaataaaaatcctgtccacaaaatccaa
gagggggatttcaagaacatgctgaggttgaaagagcttggcataaacaacatggctgag
ctggtgtccattgaccgctacgctttggattatctcccagagctgaccaaactcgaagcc
accaacaatcccaaattttcttatgtgaaccgccaggctttccgtgatgtcccttccctg
gaaagcctcatgctgaacaacaacgccctcaactccctctaccaggcgactgtggagtcc
ctccccaacctgcgagagatcagcatccatagcaaccctctgcgctgcgactgcgtcatt
cagtggatgacctccaacaagacgagcatccgcttcatggagccgttgtccatgttctgc
gccatgcccccggagttccgcggtcagcacgtcagggaggtgctgctgcacgactcccct
gagcagtgcctgcccatgatgtcccatgacaccttccccaaccacctcaacctggacatc
ggcatgactgttgatctggactgccgtgccatggccgaacccgaaccggagatctactgg
gtcacaccactgggcaacaaggtgatgatggacaccgtgtccgagaagtaccgcctcaac
aaccaggggaccctgcgcatctccaacatccaggtggaggactctgggcattacacttgt
gtagcccagaacgtggaaggtaaggacacgcgagtgaccgcactccgcgtcaatggcact
ctaatagacagcacacagctcatgaagatctacgtcaaacacaccgagtcccactccatc
ctggtgtcctggaaggtcaactcgaacgtcatgacgtccaaccttaagtggtcgtcggcc
accatgaaaatcgacaacccccacatcacctacaccgccaaggttcccgtggacgtgcat
gagtacaacctcactcacctgcagcctgccaccgaatacgaagtctgcctgtccgtctcc
aacatccaccagcagacgcagaagtcctgtgtcaacgtcaccaccaagcacgccacgttt
gcggtggcgatctctgaccagggcaccagcactgcactggcagccgtcatgggcaccatg
ctcgccatcatcagcctggcctccatcgctgtatatatcgccaagaggtggaagagaaag
aactaccaccactctctgaaaaaatacatgcagaagacatcttcgatccccctgaatgag
ttgtaccctcccctaatcaacttgtgggatgccgacaatgacaaagacaaggatggatct
tcagagaacaagcccacccaggtcgacacaacaagaagctattacatgtggtga
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