Alosa sapidissima (American shad): 121706422
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Entry
121706422 CDS
T11137
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04060
Cytokine-cytokine receptor interaction
asad04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121706422 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121706422 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
asad04052
]
121706422 (gdf5)
Cytokines and neuropeptides [BR:
asad04052
]
Cytokines
Transforming growth factors (RSTK binding)
121706422 (gdf5)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
121706422
NCBI-ProteinID:
XP_041944098
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Position
4:complement(10465466..10470090)
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AA seq
535 aa
AA seq
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MKVLKRLPLLLGCWTLLYLNFVSVSTGLTGEGQRSTARRPGTHTDADRSGSTASLMVGNY
GATGGKSSSGARITRIRTGPPLIKGESSKAQSVTSVTSVKRTASGVNSRSVAPINLGRRE
AARSWVPGDGSRPASGGASAPAALSTHLGKNAAAQSNGKAGARTVPAAGRTGPARAVSAQ
RGFSPLAQRSSKVLPKTDTDPPKHPLVTPHDYMLSLYWSLSTGEVNTSVLHEAGLANTIT
SFVDKGQDDRLPQLRRQRYSFNISSLDKEGLLGAELRILRKRLTEPRKPQASGGPVTLRL
YTCAAGKQKASLLQSRPIEDHAISKWEVFDIWKLFKSFRNVAQLCFELEAVEQGRGATDL
RKLGFARVGRQTKEKAFFVVFSRTKKRGLFYNEIKARSGHDNKTVYEYLFTQRRMRRAPL
PRSKKPVKSPKPRCNRRQLHVNFKEMGWDDWIIAPLEYEAYHCDGVCDFPIRSHLEPTNH
AIIQTLMNSMDPRSTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtattgaaacgtctccctcttttattggggtgctggactcttttatacctcaac
ttcgtctcagtgtctacgggccttacaggcgagggacagcgctcaactgcgaggagacca
ggcactcacacagacgcagatcgaagcgggagtactgcatcgttaatggtggggaactat
ggtgctacgggtggaaagtcttccagtggagcaaggatcacacggatccgaactggaccc
ccactgataaagggcgagtcctctaaagcgcagtccgtgacatcagtgacaagcgtaaag
aggaccgcaagtggggtgaacagtcgctctgtggcacccatcaatttgggacgcagggaa
gctgcgcgttcttgggtacccggagatggaagccgaccagcctccggtggcgcatctgcc
cccgcggcactcagcactcatttaggaaagaatgcggctgcacagagcaacggcaaggcg
ggtgccaggacagtaccggctgcagggagaacaggaccggcgcgcgctgtgtctgcacag
agaggattctcacccttggcgcaacgcagttctaaagttttaccaaaaactgacacagac
ccgccgaagcacccgctggtgacgccgcatgattatatgctgtcgttatattggtcgctt
tcaacaggggaagtgaatactagtgttttacacgaggctggcctggccaacaccatcacc
agttttgttgataaaggacaagatgatcgtctcccgcagctgaggaggcagcggtattcc
ttcaacatcagctcactggacaaagagggcctgctcggcgctgagctccgcattctccgc
aagcgcctgaccgagccgcgcaagccgcaagcctcgggcggccccgtcaccctgaggctc
tacacctgcgccgcaggtaagcagaaggcctccttgctccagtcgcgcccaatcgaggac
catgccatctccaagtgggaggtgtttgacatctggaagctgtttaagagcttccggaac
gttgcgcagctctgcttcgaactggaggccgtggagcaggggcgtggggcgacggacctc
aggaagctgggcttcgcccgcgtaggccgccagaccaaggagaaggccttcttcgtggtg
ttcagccgcacgaagaagcgcggcctcttctacaacgagatcaaggcgcgctcgggccac
gacaacaagaccgtctacgagtacctgttcacccagcggcgcatgcgccgtgccccgctg
ccccgcagcaagaagcccgtcaagagccccaagccgcggtgcaaccggcgccagctgcac
gtcaacttcaaggagatgggctgggacgactggatcatcgcgccgctggagtacgaggcg
taccactgcgacggcgtgtgcgacttccccatacgctcgcacttggagcccaccaaccac
gccatcatccagaccctcatgaactccatggacccccggtccacccccccgacctgctgc
gtacccacccggctaagccccatcagcatcctctacatagactcagccaacaacgtggtg
tacaaacagtatgaggacatggtggtggagtcatgtggctgcaggtag
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