Alosa sapidissima (American shad): 121706427
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Entry
121706427 CDS
T11137
Symbol
bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121706427 (bhlhe40)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121706427 (bhlhe40)
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
DUF5365
Oscp1
Motif
Other DBs
NCBI-GeneID:
121706427
NCBI-ProteinID:
XP_041944105
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Position
4:10221530..10225795
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AA seq
412 aa
AA seq
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MERITSAQPPPCMAKHPSLEIADMSGMDFPMYVYKPRRGGMKRGEDSKDTYKLPHRLIEK
KRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKAMNSLLEQQQQKIISLQ
NGLQIGEQGSGSPENSEEMFRSGFHLCAKEVLQYLANKENSQDMTPLHVMRHLQKVSSEL
LQGAESPHSEEPAFEAPESREKPASGPQPKAPEGHAKNCVPVIQRTYTHGNGEQSGSDTD
TDSGYGGELEKRDAKAHQRVSGYYTAKEVEMAKYGLSERVKQESDEPQAKRQRADSSEDE
SLSGHEAVAGHGGYVSFSPHQAPLCMPFYLIPPSTAAAYLPMLDKCWYPGGMPVLYPGMG
GSPPSLSPEKLPSSLVMSPRVGSPTTPQTPMDSPALLQALKQVPPLNLETKD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggattacaagtgcgcaacctccaccatgtatggcaaaacacccgtcgctggag
atagctgacatgtctggaatggattttccaatgtatgtgtataagcctcggcgaggtgga
atgaaacgaggagaagacagcaaggatacttacaagttaccccatcgattaattgagaag
aaaaggcgagatcgaatcaatgagtgcatcgcgcagttgaaagacttgctgccagaacac
cttaaactaacaacgctgggccatttggagaaagctgtggttctggagcttactctcaaa
catgtgaaggctatgaacagcctgctggagcaacagcaacagaaaatcatttcactacag
aatggcctgcaaatcggagagcagggcagtggcagcccggagaacagtgaggagatgttc
cggtcaggtttccatctgtgtgccaaggaggttctccagtatctggccaacaaagagaac
agccaagacatgacccccctgcacgtgatgaggcacctgcagaaggtgtcctccgagctg
ctccagggagcggaaagcccgcacagtgaggagccggccttcgaagcacccgagagccgg
gaaaagccagccagcggcccccagcccaaagctcccgaaggccacgccaagaactgcgtg
cccgtcatccaacggacttacacgcatggcaacggcgagcagagcggcagcgacacagac
accgacagcggatacgggggcgagctggagaagcgcgacgccaaggcccaccagcgggtg
agcggctactacaccgccaaggaggtcgagatggccaagtatggcctgagcgaacgcgtc
aagcaggagagcgacgagccccaggccaagcggcagcgcgccgactcgtctgaagatgag
tcgctctcgggccacgaggcggtggcgggccacggcggctacgtcagcttctcaccgcac
caggcgcccctatgcatgcccttctacctcatcccgccctccaccgccgccgcctacctg
cccatgttggacaaatgctggtacccaggtggcatgcccgtcttgtacccgggcatgggg
ggctctccgccgagcttgtcccccgagaagctcccctcgtccctggtcatgtctcccagg
gtgggctcccccacaacccctcagacccccatggactctcccgccctcctccaagctctg
aagcaagtgccccccttgaacttggaaaccaaagactga
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