Alosa sapidissima (American shad): 121706484
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Entry
121706484 CDS
T11137
Symbol
cacna2d2b
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2b isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04010
MAPK signaling pathway
asad04260
Cardiac muscle contraction
asad04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121706484 (cacna2d2b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121706484 (cacna2d2b)
04261 Adrenergic signaling in cardiomyocytes
121706484 (cacna2d2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121706484 (cacna2d2b)
Ion channels [BR:
asad04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121706484 (cacna2d2b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
Cache_3-Cache_2
MCP-like_PDC_1
VWA_CoxE
Fe_dep_repress
Peptidase_M3
dCache_2
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
121706484
NCBI-ProteinID:
XP_041944213
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Position
4:complement(28712698..28743593)
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AA seq
1097 aa
AA seq
DB search
MAICSQPCSIACLISVQIILIFCVPWLGVDSHRFPQQYTIMHWARRIEQEIDRVLQHISG
AQQLKGIYSEKRRQYSLMKNNPQDMVERVASDIEKLLAKKRKALSRLASEAERLQKEHLW
QDSIKELDMKYYDSKADLDYYSMEGESEPSNSLELEFVYDPNFKNHVNYSFTAVQIPTDI
YKGAPVILNELNWTQALEKVFMENSREDPALLWQAFGSATGVTRYYPATPWRVPDKIDLY
DVRRRPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVTEMLDTLSDDDYVNVARFNE
KAEPVVPCFEHLVQANVRNKKIFKDAVNQMQAKGTTEYKSGFHFAFDQLLNKTNVPRAHC
NKIIMLFTDGGEDRAQDIFEQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYYFEI
RSICAIRINTQEYLDVLGRPMVLAGDDAKQVQWTNVYQDALGLGLVVTGTMPVFNLTVEG
NSQNQLILGVMGIDVHLDELKKLTPRYNLGANGYVFAIDQNGYLLLHPNLQPKAMDLPEP
VTLDFLDAEVEDAKKQEIRRQMIDGKLGQMTIRTLIKSVDEKYVDEAERTYTWTHIKDTD
YSLGLVLPPYSEYYLQADLSDVILQLQYLQSLLPNSFEAGGHVFLAPREYCQRLPIAENN
TQFLADFISFVVNLRPDSEDCNQDLIHNLLLDSEIMYQLATRVWKSKDLNTYGFLALFAA
TDSGITRVYPKMAADSWEEDAEPFNTNFYRRSLDNKGYMFKAPSRVSMDDPLTSENGTVG
ILVSTAVEVTVGARTLKPAVVGVKLDLEAWVDKFKILASNVSDNRQGSHKCGPSRSCEMD
CEVNSDDLLCYLIDDGGFLVMSNQRDHWKKVGLFFGDVDPYLMHALYESSIFTRRQTFQY
QSACEPIISGHTGAAPRGIFVPSIADFLRLAWWSSAAAWTLLQQLLHGLAFTSWFSADDA
MADGFDPRGSTSCVTIQSQFYFTNTTNTYDMLQDCGNCSRLFHSKRIENTNLLFVVAETL
PCGTCEVERLTLLKTEFQEENPCEVLNSSRYRKGPTKCFDYHILENTTECGRGYSLHASF
AVLIWVKIISYYLTVGS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatgttcacagccgtgcagcatcgcctgcctaatatccgtccagataatccta
attttttgcgtaccatggcttggagtggatagtcacaggtttccccagcagtacacgatc
atgcactgggcccggcgtatcgagcaggagattgacagagtactgcagcacatcagtgga
gcgcagcaacttaaggggatctacagtgagaaaaggagacagtacagtctgatgaagaac
aacccacaagatatggtggagagggtggcatcagacattgagaaacttttggcaaagaaa
cgcaaggccctcagtaggctggccagcgaggcagagcgtctgcagaaggagcacctctgg
caggacagcatcaaggagctggatatgaagtactatgattccaaagcagacctggactat
tactccatggagggtgaaagcgagccatcaaactcgttggagttagagtttgtttatgat
ccaaacttcaagaaccatgtcaattattcattcacagcagtacagatccccacagacatc
tacaagggtgcgccggtgattctgaacgagctgaactggacgcaggctctggagaaggtg
ttcatggagaacagtcgggaggaccctgccctcctctggcaggcctttgggagtgccaca
ggggtcacccgctactatccagctaccccgtggagagtacctgacaagattgacctttat
gatgtcagacggagaccctggtacattcagggagcctcatctccaaaggacatggtcatc
ctggtcgatgtgagtggcagtgtgagtggcctgaccttaaagctgatcaaggcatcggtg
acagaaatgctggacacactttcagatgatgactacgtcaatgtggctagattcaatgag
aaggcagagccggttgtcccttgctttgagcacctggtgcaggctaatgtacgcaacaag
aagatcttcaaggacgccgtcaaccagatgcaggccaagggtaccacagagtacaagtcc
ggcttccactttgccttcgaccagcttctgaacaagacaaatgtgccacgagcacactgc
aacaagatcatcatgttgtttacggatggtggagaggatcgggcgcaggacatttttgag
cagtacaattggcctaacaagacagtgcgagtattcacattctctgtggggcagcacaat
tacgacgtcacgcctttacagtggattgcatgtgcaaataaaggatactattttgagatc
cggtccatctgtgccataaggattaacacacaggagtatttggatgttcttgggcgtccc
atggtcttggctggggatgacgccaagcaagtccagtggaccaatgtctaccaggatgca
ctgggcttgggtctggtggtgacagggaccatgcctgtatttaacctgacggtggaaggt
aactcacagaaccagcttatactgggagtgatgggcatagatgtgcatctggatgaactc
aagaagcttactcctcgctacaatcttggagctaatggatatgtttttgccatcgatcag
aatggctacctcctcctccatcccaacctgcagcctaaggccatggacctccctgagcca
gtgacactggacttcttggatgccgaagtagaagatgccaaaaagcaggagattcggagg
cagatgatcgatgggaaactggggcaaatgacaattagaacactgatcaaatcggttgat
gagaaatacgttgatgaagctgaacggacgtatacctggacacatatcaaagacacagat
tacagtttgggcctggtactgccaccctacagtgaatactaccttcaggcagacttgagc
gatgtgattttacaactgcagtatttgcagtctttgctgccaaactcatttgaggcaggc
ggacatgttttcctggcaccaagggagtactgtcagcgtcttcccattgcagagaacaac
acacagttcctggcagactttatctcctttgtcgtgaatctgagaccagactcagaagac
tgtaatcaagacctcattcacaacctacttttggactcagaaatcatgtatcagctggct
acaagagtgtggaagagcaaagacctcaacacgtatggcttcctggcattgtttgcagct
acagacagtggaatcacacgtgtctaccccaaaatggccgctgattcatgggaggaagac
gcagagccctttaacaccaacttctaccggcgtagcctcgacaacaaaggctacatgttc
aaggctccgtcgcgtgtctccatggatgatcccctgacctctgaaaatggcactgtgggc
attctggtcagcactgcagtagaggtgaccgtcggggctcggactctgaagcctgcagtg
gtgggagtgaaactggaccttgaagcttgggtggataagttcaagattttggccagcaat
gtgtcagacaatcgtcagggctctcataagtgtgggccttccagaagctgtgaaatggac
tgtgaagtgaacagtgacgatctactctgttacctgattgatgatggtggtttccttgtt
atgtccaatcagagagatcactggaaaaaggtggggctgttttttggcgatgtggatccc
tacctgatgcatgctctgtatgaaagctccatcttcacccgtcgccagaccttccagtac
cagtctgcgtgtgagcccatcatcagcggccacacgggggcagcaccgaggggcatcttc
gtgccctccatagcagactttcttcggcttgcttggtggtcctcggcagctgcatggact
ctacttcagcagctgctccatggacttgcctttaccagctggttcagtgcggatgatgcc
atggctgacggcttcgacccaagaggaagcaccagctgtgtgaccatccagagccagttc
tacttcaccaacacaaccaacacctatgacatgctgcaggactgtgggaactgctcaaga
ttgttccactccaaacggatcgagaacaccaacttgctttttgtggtggctgagactctg
ccctgcggcacctgcgaagtggagcgactgaccctgctaaaaactgagtttcaggaagag
aacccatgtgaagtcctcaactcatctcgttatcgcaaaggtcctacaaagtgctttgac
taccacatactggagaacacaaccgagtgtggacgaggctactccctccatgcctcattt
gctgtcctcatatgggtgaaaatcatttcatattacctcactgtcggttcttga
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