Alosa sapidissima (American shad): 121706583
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Entry
121706583 CDS
T11137
Symbol
znfx1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121706583 (znfx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
ZNFX1
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
DEAD
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_22
AAA_25
PhoH
Motif
Other DBs
NCBI-GeneID:
121706583
NCBI-ProteinID:
XP_041944382
LinkDB
All DBs
Position
4:18246094..18258057
Genome browser
AA seq
1896 aa
AA seq
DB search
MENRNRGERARPRPNAGQRGELGNRQANGAPNWERRGGGAGRGGGRGRGRGGAGRGAARG
RGGGPMRDAIFNRDDHQENRRAEGQAQRGGGGDEAQRGRGGRNGVRGRWAGAGRGTGRDG
TPPVRKISLKYLEELMEKEASEVAITLSTNSGLQVLLEERTMGHDLVQLLCEILCKAFQS
KHDRKTVQHLARVIKDSGFMRTILPHYVTGMMSDHLPARRERYPQNLDTIISLLNNVFSI
YPASSVGVVSTLVLLLKPAINQLRASGLDILDETEESLDKVQELVGHQQQKAREGTLRSD
NYSFLAADEDAPPGEEDFRTMTIYPTPEEFHQDEKPFLRPNITSQRYPSGHVYLDTHFRL
LREDFVRPLREGIRQLLQTQADQSLDGTPMKKRRFDDIRIYFDTRLVVPLCTSTGVAYKV
QFDPRPLQFVRWQNSKRLIYGSLVCLSMDNFDTFLFATVTDRKVEDLQQGQVLLSFSRDS
RPALARVQPSDSFLMVETTAYFEAYRYVLEGLQEQLVEDLPFQRYIVECNPDIHPPAYLR
TEPRQYNLSSIAAEGFKDSVQPFNPLTADAWPSEEQLGLDESQIRALKLALTKELAIIQG
PPGTGKTHVGLKIAHALLDNHGAWGYGSPMLVVCYTNHALDQFLEGIHKFLEKGIVRVGG
RSNSEVLKRFALRELTRSPQFRRELPQHLRRAYFEIHKELAEAEQLIKRQAAQLECSLRG
VIHEQFLERYISEVHWDSLCVQPLADGFQSVGERQSMILEWLGFGSTHFQYRPNGNHDEE
EDGVEPVDVDLIEVDEEADLIQAERVLDDAIHRDQDRDQERERKKRKDEENVEELAHLML
AMNVGRARAEEEQQPPGQSQAGEEWEMQKQQKRKLKQTMRAELKKSSAMTEAEEARVTNI
WTLPPKEKWKLYRLWIYRFQTEQRTRVLQTEQVYQDAAERLAEIRMREDLCVLRDAKVIG
MTTTGAAKYRQALQEVRPRLVIVEEAAEVLEAHTITTLSRACQHLILIGDHQQLRPSATV
YELARNFNLEVSMFERLVTVDFPYVRLNYQHRMRPEIARLLTPHIYSELENHPSVLDYEN
VKGVLTNLFFVEHQAPEEEIKDGRSHQNMHEATFVVALCRYLLHQGYQPSQITILTTYTG
QLYCLRKLMPSKEFAGVKVHVVDKYQGEENDIVILSLVRSNREGRVGFLQIPNRVCVALS
RAKQGLYCLGDMGMLSRVKLWSAILHTLREHGQVGRALALSCQNHPERRTAVASAADFAG
VPEGGCSQPCEFRLACGHVCTRACHPYDAEHKEFLCVKECPRVLCELGHRCPRLCHQKCG
KCSLPVKKVIPHCQHEQMVPCHEDACHFVCQVPCEKALKCGHVCDAKCGEPCTDRCMVKV
TMTLKCGHTQKVHCYQVREPEEPTCQTKCGTTLKCGHPCPGTCHGCKRGRLHRPCNKKCQ
HVLVCSHQCHEPCTRDCPPCSRPCQNRCVHSACRRSCGQPCAPCAEPCTWSCPHRRCGKL
CHEPCDREPCDEPCDKRLPCGHPCIGLCGDPCPSKCRVCHRDEVSEIFFGTEDEPGARFV
QLEHCKHLFEVSSMDTYMAQDEDQKAGLDQLVIKLKECPKCRAPIRRNLRYGAHINRSLA
QIEQVKEKINGNPNDIKQKQNALKTLLREQDNLRDFLQAEYGQVRDKLDKSILSLRELCH
QENLIMFLERLGKLLKTQKERMSGVPAEVFSVRLGQCLRFLEGHGQRFSEQQVWDLEREL
QRLSYLAELNSRCGKTSLMMLGVRVNEEVDALRQVLEDTRPFTEADEHRVKQALADLDAK
LPRSGLGIDDQERVMIVKAMGLPQGHWYKCPNGHVYAIGDCGGATESRRCPDCNAVIGGA
NHNLTAGNEVASEMDGARHAAWSDAANLLNFRLDDL
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccgaaacagaggggaaagggcaagaccaagaccaaacgctgggcaaagagga
gagcttggaaatagacaggccaatggtgcaccaaattgggaaagacgaggtggtggagct
ggaagaggtggaggacgtggcagaggaagaggtggggcaggaaggggagcagcaagaggg
cgtggaggagggcccatgagagatgccatattcaacagagacgaccatcaggagaacagg
agggccgagggtcaggctcagagaggaggtgggggtgatgaggcccagagaggaagagga
gggagaaatggcgtcagaggccgatgggcaggggcgggcaggggcactgggagagacggc
acacctccggtgcgaaaaataagtttaaaatatttggaggaacttatggaaaaggaggct
tctgaggttgccattacactgtccaccaacagtggtctacaggttctgctggaggagaga
acaatgggtcatgatctggtccagctgctttgcgagattttatgcaaagccttccagtct
aaacatgaccgcaagactgtccagcacttggccagagtgataaaagattccgggtttatg
cgcacgatactgccacattatgtgactggaatgatgtcagaccacctcccagctcggcga
gaaagatacccgcagaatttggacaccatcataagtctgctaaacaacgtgttcagcatc
taccccgccagttcggtcggcgtggtgtccaccctggtgctgctcctgaagccggccatc
aaccagctgcgagcctcgggtctggacatcctggatgagaccgaggagagcctggacaag
gtccaagagctggtgggtcaccagcagcagaaggcccgcgaaggcacgctgcgctcggac
aactactccttcctggcggccgacgaggacgcacctccgggggaggaggacttccgcacc
atgaccatctaccccacgcccgaggagttccaccaggatgagaagccctttctgaggccc
aacatcacgtcgcagcgctaccctagtggtcacgtctacctggacacacacttccgtctg
ctgcgggaggactttgtgcggcccctgcgcgagggcatccggcagctgctccagacgcag
gctgaccagtccctggatggcacgcccatgaaaaagaggcgttttgatgacatccggatc
tactttgacacccggctggtcgtcccactgtgcacttccacgggcgttgcctacaaagtg
cagtttgacccgcgtcctcttcaatttgtccgctggcagaattccaagcggctgatctac
ggctctctcgtctgcctgtctatggacaactttgataccttcctatttgccacggtgact
gaccggaaggtggaggacctccagcaggggcaggtccttctcagcttctctcgggacagc
cgcccagcactggcccgagtgcagccctccgactctttcctgatggtggagaccacagca
tactttgaggcctatcgttatgtcttagagggccttcaagagcaactggtggaagacctt
cccttccagaggtatattgtagaatgcaacccagatatacatccccctgcctatcttcgt
acggagccaaggcagtacaatctgtccagcatcgcagctgagggctttaaggacagtgtg
caacctttcaaccccctgaccgctgacgcgtggcccagtgaggagcagttggggctggac
gaaagccagatcagagccctcaaactggccctcaccaaggagctggccatcatacaggga
ccaccaggcacaggaaagactcatgttggactgaaaattgcccacgcccttctggataat
catggagcctggggctatggctctcccatgctggtagtgtgctacactaatcatgcactg
gaccagttcctggaaggaattcacaagtttttggaaaagggcattgtgcgggtcggaggg
cgaagcaacagcgaggtgcttaagcgcttcgccctcagggagctgactcgctcaccgcaa
tttcgccgtgaacttccccagcatctccgccgtgcctactttgagatccataaggagctg
gcggaagccgagcagctgattaaaaggcaggccgcccagctggagtgcagtctgcgtgga
gtcatccacgagcagttcctggaaaggtacatctccgaagtgcactgggacagcctgtgt
gtgcagccgcttgcagatgggttccagagtgtcggcgaacggcaatccatgatcctggag
tggttgggcttcggatccacccatttccagtaccggcccaacgggaaccacgacgaggag
gaggatggcgtggagccggtggacgttgacctgatcgaggtggacgaggaggccgatctg
atccaggcagagcgtgtcctggacgacgccatccatcgagaccaggaccgcgaccaggag
cgagagcgcaagaagaggaaggacgaggagaacgtggaggagctggctcatctgatgctg
gccatgaacgtgggcagggcccgggcagaggaggagcagcagcctccaggccagagccaa
gccggggaagagtgggagatgcaaaagcagcagaagaggaagttgaagcagaccatgcgc
gccgagctgaagaagagctcggccatgaccgaagccgaggaggcgagagtgaccaacatc
tggactcttccgccaaaagagaagtggaagctgtaccgcctgtggatctaccggttccag
acggagcagcgcacgcgggtcctgcagaccgagcaagtgtaccaggacgcggccgagcgg
ctggccgagatccgcatgcgggaggacctgtgcgtgctgcgcgacgccaaggtcatcggc
atgaccacgaccggggcagccaagtacaggcaggccctgcaggaagtgcgcccccgcctg
gtgatcgtggaggaggcggccgaggtgctggaggcccacaccatcaccacgctcagcagg
gcctgtcagcacctcatcctcattggggaccaccagcagcttagacccagtgccacggtt
tatgaactggccagaaacttcaatctggaggtgtccatgttcgagcgccttgtgaccgta
gacttcccttacgtccgcctcaactaccagcaccgaatgcgtcctgaaatcgcccgtctg
ctcactccccatatatactcggagcttgagaaccacccctctgtgctggattatgagaat
gttaagggggtgcttaccaacctgttcttcgtggagcatcaggcgccagaagaggagatc
aaggatggccgcagccaccagaacatgcacgaggccacttttgtggtggcgctgtgccgc
tatctgctccaccagggataccagccctcgcagatcaccatcctcaccacgtacacaggc
cagctctactgcctgcgcaaactcatgccctccaaggagttcgccggggtcaaagtgcac
gtggtggacaagtaccagggcgaggagaacgacattgtcatcctgtcgttggtgaggagc
aaccgggaggggcgcgtgggtttcctacagatccccaaccgcgtgtgcgtggcgctgtcg
cgtgccaagcagggcctgtactgcctgggcgacatgggcatgttgagccgggtcaagctg
tggagcgccatcctgcacacgctgcgcgagcacgggcaggtggggcgggcgctggcgctg
agctgccagaaccacccggagcgccgcacggcggtggcgtcggcggccgacttcgccggc
gtgcccgagggcggctgcagccagccgtgcgagttccggctggcgtgcggccacgtgtgc
acgcgcgcctgccacccgtacgacgccgagcacaaggagttcctctgcgtcaaggaatgc
ccgcgggtgctgtgcgagctcggccaccgctgcccacgcctctgccaccagaagtgcggc
aagtgcagcctgcccgtcaagaaggtgatcccgcactgccagcacgagcagatggtgccc
tgccatgaagacgcctgccacttcgtctgccaggtgccctgcgagaaagcccttaagtgt
ggtcacgtgtgtgacgccaaatgcggggagccgtgcacggaccgctgtatggtgaaggtc
accatgacgctcaagtgcggtcacacccagaaagtgcactgttatcaggtgagagagcca
gaggagccgacctgccagaccaagtgcggcaccacgctcaaatgcggccacccgtgcccg
ggcacctgccatgggtgcaagcgcgggcgcctccaccgtccgtgcaacaagaagtgccag
cacgtgctggtgtgctcgcaccagtgccacgagccgtgcacgcgcgactgcccgccctgc
agccggccctgccagaaccgctgcgttcacagcgcctgccgcaggtcatgcgggcagcct
tgcgccccttgtgctgagccctgtacgtggagttgcccgcaccgccgctgtggcaagctc
tgccacgagccttgtgaccgagagccctgcgacgagccctgcgataagcgcctgccctgc
ggccacccttgcatcggcctttgcggcgacccgtgccccagcaagtgccgcgtgtgccac
cgcgacgaggtgtccgagatcttcttcggtacggaggacgagcccggcgctcgcttcgtc
cagctggagcactgcaagcacctgttcgaggtgtcctccatggacacctacatggcccag
gacgaggaccagaaggccggcttggaccagctggtcatcaagctgaaggagtgccccaag
tgccgcgcgcccattcgcaggaacctgcgctacggggctcacatcaaccgcagtctggcc
caaatcgagcaggtcaaggagaagatcaacgggaatccgaatgacattaagcagaagcag
aacgccctcaaaaccctcctgagagaacaggacaacctgagagacttcctccaggcggag
tatgggcaggtccgagacaagctggacaagtccatcctctccctgcgggaactgtgccac
caggagaacctcatcatgttcctggagcgcctggggaagctgctgaagacccagaaagag
cgcatgtccggcgtgccggccgaagtcttctccgtgcgtctgggccagtgcctgcggttc
ctggagggccacggtcagcgcttctccgagcagcaggtctgggatctggagcgcgagctg
cagaggctctcctacctggccgagctcaatagccgctgtgggaagaccagtctgatgatg
ctgggtgtccgggtgaacgaggaggtggacgccctcaggcaggtgctggaagacacacgc
ccgttcacggaggcggatgagcatcgggtcaagcaggcgctggctgacctggacgccaag
ctgccccgtagcgggctgggcatcgacgatcaggagagggtgatgatcgtcaaagctatg
ggtctgccccaaggccactggtataagtgtcctaacggtcatgtctatgctattggagac
tgcgggggagccacggaaagtcggaggtgcccagattgcaatgccgtgatcgggggtgcc
aaccacaaccttacagctggtaacgaggtagcatctgagatggatggcgctcgacatgct
gcgtggtctgacgctgcaaacttgttaaacttccgccttgatgacctgtga
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