Alosa sapidissima (American shad): 121706771
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Entry
121706771 CDS
T11137
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121706771 (ift52)
Cilium and associated proteins [BR:
asad03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
121706771 (ift52)
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Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
Motif
Other DBs
NCBI-GeneID:
121706771
NCBI-ProteinID:
XP_041944709
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Position
4:complement(23270520..23276272)
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AA seq
435 aa
AA seq
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MDKDQRNSVAFNASKRELFTANSGYKSLQKRLRVQWKIQSIKDELTQEKLMGTKLWITAG
PREKFTGSEFEVLKHYLDGGGNILVMLGEGGETRYDTNINFLLEEYGIMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKTVTGVIDDESAGNNAQALTFVYPYGATLSVMKPA
VAVLSTGSVCFPLNRPVLAFYRPKDGGKLAVLGSCHMFSDQYIDKEENNKIMDVVFQWLM
TDNIHLNQIDAEDPEITDYTMLPDTGCLSERLRVCLQEGDENPRDFTSLFDMSLMKLSTD
TLPRVISSYKQLHVKHEQLQLIQPQFETPLPALQPAVFQPAFRDLPPPMLDLFDLDETFS
SEKVRLAQLSNKCTDDDLEFYVRKCGDILGVTGKLDKDHRDAKHILEHIFFQVVEFKKLN
QEHDIDTTDVRFSPL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaccagcgcaacagcgttgcttttaatgcatcgaaaagagaactattcacc
gctaattcaggatacaagtctcttcagaagagacttcgggtacagtggaagatacagagt
ataaaagatgagcttacccaggagaaactgatgggcactaagctatggatcactgcggga
ccaagagagaagttcactggatctgagtttgaagtcctcaagcattatctggatggcggt
gggaatatccttgtgatgttgggagaaggaggggaaaccagatatgacactaacatcaac
tttctcctagaggagtatgggatcatggttaacaatgatgctgtggtgaggaatgtttat
tacaaatattttcaccccaaagaagcattagtgtccaatggcgttttaaacagagagatc
agtagagctgctggcaaaactgttacaggtgtcattgatgatgaaagtgctggaaacaat
gcacaggcccttaccttcgtctacccatatggagccacactgagtgtaatgaaacctgct
gtggctgtgctttccactggctctgtctgcttccccctgaaccgacctgttctggcgttc
tacagacccaaggatggaggaaaactggcagtgttgggctcctgtcacatgttcagtgac
cagtacattgacaaggaggagaacaataaaataatggatgttgtgttccagtggttgatg
acggataatattcacctgaatcagatagatgctgaggacccagagatcacagactacacc
atgttacccgacacaggatgtctgtctgagagactacgggtgtgccttcaggagggagat
gaaaatccacgtgacttcacttccctgtttgacatgtcactgatgaagctgtcaacagac
accctgcctcgcgtcatcagctcctacaagcagctccatgtgaaacatgagcagctccag
ctgattcagcctcagtttgaaacacccctgcctgctcttcaaccagcagtctttcagccg
gccttcagagaccttccacctcccatgcttgacctctttgaccttgatgagacgttttct
tctgagaaagtgagactggctcagctctcaaacaaatgcacagatgacgatctggaattt
tatgtgcgcaagtgtggggacatccttggtgtgactggaaagctggataaggatcacaga
gatgcaaagcacatacttgagcacattttttttcaggtggtggagttcaagaaactcaat
caggagcacgatatcgacactacagatgtgagattttcacctctctga
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