Alosa sapidissima (American shad): 121706821
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Entry
121706821 CDS
T11137
Symbol
pparda
Name
(RefSeq) peroxisome proliferator-activated receptor delta isoform X1
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03320
PPAR signaling pathway
asad04148
Efferocytosis
asad04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121706821 (pparda)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121706821 (pparda)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121706821 (pparda)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121706821 (pparda)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
asad03310
]
121706821 (pparda)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121706821 (pparda)
Nuclear receptors [BR:
asad03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
121706821 (pparda)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
WHD_LYAR
Motif
Other DBs
NCBI-GeneID:
121706821
NCBI-ProteinID:
XP_041944806
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Position
4:complement(17482170..17508085)
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AA seq
513 aa
AA seq
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MEDSWTSVLTVNPNEGPKLWGEVGGREKPNGKLSPPSQQSSPGQPEEEVGPEDKMEQGST
GEESSWLEASPEQEQEQGLDRGAQNGHAGEEDLQEKGSSGTSASRSTGSPAPSSSGTADL
SQTSPPSLTDQLLLGRDDATGINVECRICGDRASGFHYGVHACEGCKGFFRRTIRMKLDY
ERCERSCKIQKKSRNKCQYCRFQKCLMLGMSHDAIRYGRMPEAEKRKLVAGLLAGDECSQ
NSAASDLKSLAKRVNNAYQKNLNMTKKKARSILTGKTSSTSPFVIHDMDSLWQAENGLVW
NQLINGAPPHKEIGVHVFYRCQCTTVETVRELTEFAKSIPGFVDLFLNDQVTLLKYGVHE
AIFAMLPSLMNKDGLLVANGKGFVTREFLRSLRRPFSEIMEPKFEFAVKFNALELDDSDL
ALYVAAIILCGDRPGLMNIKQVEVMQDGILQALNQHLSANHPDSSYIFPKLLQKMADLRQ
LVTENAQLVQKIKKTESETSLHPLLQEIYRDMY
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggaagattcctggacgtcagtgttgacggtcaacccgaacgaaggccccaaactgtgg
ggcgaagtcggcggcagggagaagcccaacggaaagctgtctccgcccagccaacagtcg
tccccggggcagcctgaggaggaggtgggcccggaggacaagatggagcaggggagcacc
ggggaggagagcagctggctggaggcctcaccggagcaggagcaggagcagggcttagac
aggggagcgcagaatgggcacgcaggcgaggaggatctgcaggagaaaggcagctctggc
accagcgccagccgcagcacgggcagccctgcgccctccagcagtggcacagcagatctg
tctcagacgtctcctccgtcgctcactgaccagctgctgttgggtcgggacgacgcgacc
gggatcaacgtcgagtgccgtatctgtggtgaccgggcctcaggcttccactacggagtt
catgcctgtgagggctgcaagggctttttccggcggaccatccgaatgaagctggactac
gagcgctgcgagaggagctgtaaaatccagaagaagagccgcaacaagtgccagtactgc
cgcttccagaagtgcctgatgctgggcatgtcccatgatgcgatccggtatggccgtatg
ccagaggcagagaagaggaagctggttgcaggactcttagcgggagacgaatgcagtcag
aactctgcagcctcggacctcaagtcgctggccaagcgcgtcaacaacgcctaccagaaa
aacctcaacatgaccaagaagaaggcccgcagcatcctcactggcaagaccagctccacc
tcgccatttgttatccatgatatggactcgttgtggcaggcagagaatggcctggtgtgg
aaccaactgataaacggggctcccccacacaaggagatcggggttcacgtcttctaccgc
tgccagtgcaccaccgtagagacggtgcgggagctcaccgagttcgccaaaagcatccca
gggttcgtggacctcttcctcaatgaccaggtgacgctactcaagtacggggtgcacgag
gccatcttcgctatgctgccgtcgctcatgaacaaggacgggctgctggtggcgaacggg
aagggctttgtcacgcgcgagttcctgcgcagcttacggaggcccttcagcgagatcatg
gagcccaagtttgagttcgccgtcaagttcaacgcgctggagctggacgacagtgacctg
gccctttacgtggcggccatcatcctctgtggagaccgacctgggctgatgaacatcaag
caggtggaggtgatgcaggatggcatcctgcaggctctcaaccagcacctaagcgccaac
caccccgactccagctacatcttccccaagctgctgcagaagatggccgacctgcggcag
ctggtcaccgagaacgcccagctggtccagaagatcaagaagaccgagtcagagacctca
ctgcatccactactgcaagagatctacagggacatgtactga
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