Alosa sapidissima (American shad): 121706900
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Entry
121706900 CDS
T11137
Symbol
snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121706900 (snrpe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121706900 (snrpe)
03041 Spliceosome [BR:
asad03041
]
121706900 (snrpe)
03032 DNA replication proteins [BR:
asad03032
]
121706900 (snrpe)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
121706900 (snrpe)
Spliceosome [BR:
asad03041
]
Complex A
U1 snRNP components
Sm proteins
121706900 (snrpe)
U2 snRNP components
121706900 (snrpe)
Complex B
U1 snRNP components
121706900 (snrpe)
U4/U6.U5 tri-snRNP components
121706900 (snrpe)
Complex C
U2 snRNP components
121706900 (snrpe)
DNA replication proteins [BR:
asad03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121706900 (snrpe)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
121706900
NCBI-ProteinID:
XP_041944962
LinkDB
All DBs
Position
4:19283802..19287457
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRIMLKGDNITLLQSVAS
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcataccggggacaaggacaaaaggtccagaaggttatggtccagcctattaatcta
attttcaggtatcttcaaaatcggtctcgtattcaagtctggctctatgaacaggtcaac
atgcggatcgaaggatgcatcattggctttgatgaatacatgaatctggttctggatgac
gcagaggaggttcacatgaaaaccaagaacaggaagcctctgggtcggatcatgctgaaa
ggagataacattaccctactgcagagtgtagccagctaa
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