Alosa sapidissima (American shad): 121706960
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Entry
121706960 CDS
T11137
Symbol
rbm12
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121706960 (rbm12)
Spliceosome [BR:
asad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121706960 (rbm12)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
121706960
NCBI-ProteinID:
XP_041945066
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Position
4:complement(13215665..13223180)
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AA seq
886 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGSVEGAAGNGNRPGPPATSGGSGRGSMP
TTAQGFSNTSATATTATSAHEPISNKNISTFATTSMGNMPSFNNNFSSSSITMGSTMTTA
MSSLNSVPPPIPPLPSMQSIPPMPSMPPLPGPPPVSSHPSVPTVSPLTAVPPVPPMSHMP
HLSAMPPFNPGVPPPVGPGLATSGPHLSLGSPNHMFLNPMNLNPLNLQAHLKPSITNPDD
FYVHLQGLPFNANELEVREFFHGLAVENVRLIRDNMGRSSGRALVKFFAPQDAFEAIKRG
AAMLGQRYVEITPASERQWRECGSGILGQNQSKPGHNADQDRHRRGSSSSASPSGRERAR
SRSPHKQEFCVYLKGLPYEAENKQIFEFFKNLDIVEDSIYIAYGPNGRATGEGFVEFRNE
MDYKAALGCHMQYMGSRFIQVHPITKKAMFEKIDAIRKRMQGSQGDQKGSSTEGGKNPRN
CAHISNIPYNVSKKDVRLFLNGIQLFEDTLKVLVDSNGNGLGQAIVQFKSEEEALKAERL
HRQKLNGRDAFVHLVTFDQMKEIERNPPPQSRRGQKSQGNVHAQVQAQAQAQVQAQVQAQ
AHAYPAMSGEEFNFLRNSVGSLSNGPPFVTPFTAPGNGLAGPPPLPPLGATLGDVTLGVP
PPLVGAHLPGPVLEPPGFRPGGSNGPPGFVGGPESLRGLPPFDNGSRKGGNHNRGGGQGP
TGGPQPSFGSASDNLRGPSGGSGPSNPRPTIVKIQNMPFTVTVDEILDFFYGYQVLPGSV
CLQFSEKGLPTGEAMVAFESHDEAMSAVMDLNERPIGARKVKLTLG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcttgcagggtctccccattgtggcagggaccatggacattcgc
catttcttctctggattgaccatcccggatggtggggtgcatattgtagggggtgaacat
ggtgaagcatttatcgttttcgccacagacgaagatgccaggcttggtatgatgcgaaca
ggggggtccatcaaaggttcaaaggtatcactgttactaagtagcaagacagaaatgcag
aacatgattgagcttagccgcaggcggtttgaagctggcagtgtagagggagcagcagga
aacggtaacagaccaggcccccctgccacctctggtggaagtggtagaggtagcatgccc
actactgctcaaggtttcagtaatacatcagcgactgccaccacagctacttctgcacat
gagccaattagcaacaaaaacatttccacctttgccaccactagcatgggtaacatgccc
agtttcaacaataacttcagtagcagcagcatcacgatgggttcaaccatgacaactgcc
atgtcctccctaaactctgtaccaccacccataccacccttgcccagcatgcagtccata
ccacccatgccttctatgccacccttgccaggtccaccgcctgtatcatcccatccctcc
gtgccaacagtttcccctttgactgcagtgccacctgtacctccaatgtctcacatgcct
cacctgtctgcaatgcctccttttaaccccggtgtccctcccccagtcggacctggtctc
gctacatccggaccgcatttgtctctgggaagccctaatcacatgttcctcaacccaatg
aaccttaacccccttaatctgcaggctcacttgaagccatcgattaccaaccctgatgat
ttttacgtccacctgcaaggccttccctttaatgcaaacgagttagaagtcagagaattc
ttccatggattggctgtcgaaaacgttcgtcttattagagataacatgggcaggagcagc
ggtcgagcactagttaaattctttgcaccccaggatgcttttgaggcaataaaaagaggt
gcagcaatgctaggtcaaagatatgtggagataaccccagcatctgagaggcagtggcga
gagtgtggcagtggaatccttggccaaaaccaatccaaacctggtcataatgcagaccag
gaccgccatcgacgtggaagttcgagttctgcatctccttcaggacgtgaacgtgcgagg
tccaggtctccacataagcaagaattttgtgtgtatctgaaagggcttccatacgaagct
gaaaacaaacagatatttgaatttttcaaaaacctggacattgttgaagatagcatttac
attgcttatggacctaacgggagagcaacaggggagggttttgtagagttcagaaatgag
atggactacaaagctgcccttgggtgccatatgcagtacatgggtagtcggttcatacag
gtccatcccatcactaagaaggctatgtttgaaaagattgatgccattcgcaaaaggatg
cagggttcccaaggtgatcagaaaggtagttctacagaaggaggaaaaaacccaagaaat
tgtgcccacatctcaaatatcccatacaatgtgtccaagaaggatgtgcgtctcttcttg
aatggaatccagttgtttgaggataccttaaaagttctagttgacagtaacggcaatggc
cttggccaagcaatagtgcagtttaagtctgaagaagaagcacttaaagcagaaagatta
catagacaaaagcttaatggcagagatgcctttgttcatttggtcacatttgaccaaatg
aaggaaatagaaagaaacccaccgcctcagtccaggagagggcagaaatctcaaggtaat
gtccatgcgcaagtgcaggctcaggcccaggctcaagtccaagcccaagtgcaggcccag
gcgcatgcttatcccgccatgagtggagaggagttcaacttcctcagaaacagtgtagga
agcctaagtaacggtcctccttttgtaactcctttcactgccccaggcaatggtcttgct
ggcccccctcccttgccacctcttggcgccactttgggagatgtcacgcttggtgtgccg
ccacctttggtcggtgctcacttgcccggtccagttcttgagccaccagggttccgacca
ggaggtagcaatggacctcctggttttgtgggaggcccggagagtctgagaggccttccg
cctttcgataatgggtctaggaagggaggcaaccacaacagaggaggtggacaaggcccc
actgggggacctcaaccttcctttgggtccgcctcggacaatctgagggggccgtctggg
ggcagtggccccagtaaccctcggcctaccattgtcaagattcaaaatatgcccttcaca
gttaccgtagatgagatacttgattttttctatggttatcaagtgctgccgggttccgta
tgccttcagttcagtgaaaaaggcctgccaactggcgaggcgatggttgcatttgagtcc
catgacgaggctatgtctgcagtcatggatttgaatgagaggcctattggagcaaggaaa
gtaaagttaactttgggatag
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