Alosa sapidissima (American shad): 121707125
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Entry
121707125 CDS
T11137
Name
(RefSeq) red-sensitive opsin-1-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
asad04030
]
121707125
G protein-coupled receptors [BR:
asad04030
]
Rhodopsin family
Vision
Opsin
121707125
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srt
7TM_GPCR_Srv
TctB
Motif
Other DBs
NCBI-GeneID:
121707125
NCBI-ProteinID:
XP_041945378
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Position
4:15589462..15591988
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AA seq
357 aa
AA seq
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MAQQWEDAVFAARRRGDESTRESMFTYTNANNTRDPFEGPNYQIAPRWVYNIATLWMFFV
VAASVFTNGLVLVATAKFKKLRHPLNWILVNLAIADLGETVIASTISVINQINGYFILGH
TCCILEGYTVATCGIAALWSLTIISWERWVVVCKPFGNVKFDAKWATGGIVFSWVWSAVW
CAPPVFGWSRYWPHGLKTSCGPDVFSGPEVPGIQSYMVVLMITCCFIPLGIIILCYIAVW
LAIRAVAQQQKDSESTQKAEKEVSRMVVVMIVAYCVCWGPYTAFACFGAANPGYPFHPLL
AAMPAYMAKSATIYNPIIYVFMNRQFRSCIMQLFGKAGDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtgggaggatgcagtctttgctgcgaggagaaggggagatgaatctaca
agggaatcaatgttcacctacacaaatgcaaataatactagagatccatttgagggaccc
aactaccaaattgccccaagatgggtctacaacatcgctacactttggatgttctttgtg
gtcgctgcctctgttttcaccaacggcctggtgctggtggctacagcaaagttcaagaag
ctccgtcaccctctcaactggattttggtcaatctggctattgctgatcttggggaaaca
gtcatagccagcaccatcagtgtgattaaccagataaacggctactttatcctggggcac
acctgttgtattcttgaaggctacactgtggctacctgcggtattgctgctctgtggtcc
ctgactatcatttcttgggagagatgggtggttgtgtgcaaaccctttggaaatgtcaag
tttgatgccaaatgggccacaggaggaattgtcttctcatgggtgtggtcagcagtctgg
tgtgcacctcccgtctttggctggagcaggtattggcctcatggcctgaagacctcatgt
ggacctgatgtgttcagtggacccgaggtccctgggatccagtcctacatggttgtcctg
atgatcacctgctgcttcattcccctgggtatcatcatcctctgctacattgctgtctgg
ctcgccatccgcgctgtagcccagcagcagaaggattctgagtcaacacagaaggctgag
aaggaagtgtccaggatggtggttgtcatgatcgttgcctactgcgtctgctggggacca
tatacagcctttgcctgcttcggtgcagctaacccaggatatccattccatcctttgctt
gcagccatgcctgcctacatggccaagagcgccaccatctataaccccattatctatgtc
ttcatgaaccgacagttccgttcatgcatcatgcagctctttggcaaggcgggtgatgat
ggatccgaagtatccacatccaaaacagaagtctcgtctgtggcacctgcataa
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