Alosa sapidissima (American shad): 121707266
Help
Entry
121707266 CDS
T11137
Symbol
cntn4
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121707266 (cntn4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asad00537
]
121707266 (cntn4)
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
Contactins
121707266 (cntn4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asad00537
]
Others
121707266 (cntn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Sp38
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Pur_ac_phosph_N
Ig_4
C2-set_2
Ig_5
Tissue_fac
Interfer-bind
fn3_2
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
121707266
NCBI-ProteinID:
XP_041945617
LinkDB
All DBs
Position
4:complement(8621539..8722717)
Genome browser
AA seq
1033 aa
AA seq
DB search
MMLLWKLLVLQSLMGCLAVGSGQQSPVFTKQPGSIVFPLDSLEKSREVVFSCEALGSPPP
FYRWRLNGSIIDPALSSHYTLSGGNLRISHLNKDQVAGTYQCLASNSFGTIISREASLTF
AYLENFKTHRRSSVLVREGQGVVLLCGPPSHSGGLTFSWIFNKYPSVVKQDSRRFVSQKT
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVEGPPTPLVLRSDGVMGEYEPKIEVQFPELVP
VAKGSTVKLECFALGNPVPSITWRRTDGVPFSRKVDMRKASGVLEIPYFQQEDAGIYECT
ADNAKGRNAVKGKLSFYAPPQLIELPQDVQKAMDESLVWECKATGKPKPSFRWMRNGENL
ESDEGRVQVINGALTISRLMLDDMGMYQCVAENKHGEVYSNAELKVVAVAPDFSQNLLKT
HMMVREGGDVLIECRPKMSPWGVISWRKGAEALRESSRISILDNGSLRLSNATKSDAGVY
TCFARNKFGEASSTGNLLVKEPTVITTQPATLDVTVGESIVLSCQVTHDPSLEPRFTWFF
NEQLIKFGSHGDYFEKVGGHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIATDLIVRGP
PGPPTSVHVEEISDNTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVGGRR
LTATVTDLSPWVEYEFRVLASNSIGTGEPSKPSKQARTKETLPKVTPANVSGGGGSRSEL
VITWEPVPEELQNGEGFGYVVAFRPLNATSWMQAAVPLADASRYIFKNDSVLPFAPFQVK
VGVYNNKGEGPFGPIVTVYSAEEEPVRTPNRVRAKSLSASEVEVTWRGLPWYTSKRPDLS
KRILGYELRYWEKTEKEETASVLRTVGNQTTAIIQGLKGSSTYCVAVRAYNTAGTGPSSG
VANVTTKKPPPSQPPLKVMWNTSNSKIILNWEQVKALENESEVMGYKVLYKRNRHSRPSV
METNTTSVELSLPIDEEYIIQIKPFGEGGEGSSSRQITIPRISGSTAMGSASTVSTLSAL
STIALSFTARTSL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctggtgctgcagtcattgatggggtgccttgcagtgggc
agtggccagcagagccctgtcttcaccaaacagcccggcagcatcgtatttcccttggac
tccctggagaagagcagggaggtggtcttcagctgtgaggcactaggcagcccccctcca
ttttacaggtggaggttgaacggctccattatcgacccggcgctaagctcccactacacc
ctgtccggaggaaacctgcgcatcagccacctgaacaaagaccaggtcgccgggacctac
cagtgcctcgcatccaactcttttgggaccatcatcagccgagaggcgagtctaaccttc
gcatacctggaaaacttcaagacccacagacggagctcggtgttggtgcgtgaagggcag
ggcgtggtgctcctgtgtggacctccctcccactccggaggtctgacgttttcctggatt
ttcaacaagtacccatcagtggtgaaacaggatagccgtcgcttcgtgtcccagaagacg
ggtaatctttacatcgccaaggtggagccgtccgatgtgggcaactacacctgtgtggtg
actaacactgtcaccaagaccagggtggagggacctcctactccattagtgctacgttct
gatggtgtgatgggtgaatatgaaccaaagattgaagtgcagtttccagagcttgtacca
gtggccaaaggctccacggtgaagctggagtgttttgccttgggaaacccagtgccatcc
ataacgtggcgcaggaccgacggcgtgccgttctctcggaaagtggacatgcgcaaggcc
agtggcgtcctggagatcccgtacttccagcaggaggatgctgggatctacgagtgcacg
gccgacaacgccaagggaaggaacgcggtgaaaggcaaactgtccttctacgcccctccc
cagctgatcgagctaccgcaggatgtgcagaaggccatggatgagtctctggtgtgggag
tgcaaggccaccggcaagcccaagccctccttcagatggatgagaaatggagagaatctg
gagtctgacgagggaagagtgcaggtcatcaatggggcgctaaccatcagccggctgatg
ctggacgacatgggcatgtaccagtgcgtggccgaaaacaagcacggggaggtgtacagc
aacgctgagctcaaagttgtcgctgtggcgccggatttctcacagaacctgctgaagaca
cacatgatggtgcgtgagggcggtgatgtgctaatcgaatgtcgacccaagatgtccccc
tggggcgtcatctcctggaggaagggagccgaggccttgcgcgagtccagcaggatctcc
atcttggacaatggaagcctaagactatcgaacgccaccaagtcagatgcaggtgtctac
acctgctttgccagaaacaagtttggagaggcaagcagcactggaaatctcctggttaaa
gagcccacggtgatcaccacccagccggcgacgctggacgtgacggtgggcgagagcatc
gtcctgtcctgtcaggtgacccatgacccctccctggagccccgcttcacctggttcttc
aacgagcagctcatcaaattcggcagccacggtgactactttgagaaagtcggcggacac
tccgccggggacatcatgatccggaacattcagctgaggcatgctgggaaatatacctgc
gccgtgcagaccaaggtggacagcatctccatcgccacagacctgatcgttcgaggtcct
ccgggcccgcccacgagcgtccatgtggaagaaatcagcgataacacagcttccctctcc
tggaggcccgggccggataatcacagtccaattacggcgtacaccatccaggcaaggacg
cccttctcgctgggatggcaggccgtcaccacagttccggaggtggtgggggggcgacgt
ctgacggccaccgtgactgacctgagcccgtgggtggagtacgagttccgagtcctggcc
agcaactccatcggaaccggagagcccagcaagccctccaagcaagcacggaccaaagaa
accttgccaaaggtcacgccggcaaacgtgagtggaggaggcggcagccgctcagagcta
gtcatcacctgggagcctgttcccgaggagctgcagaacggcgaaggctttggctacgtg
gtggccttcaggccgctcaacgccaccagctggatgcaggccgctgtgcccttggccgac
gcctcccgatacatcttcaagaacgacagcgttctgcccttcgcccccttccaagtcaaa
gtgggcgtctacaacaacaaaggcgaaggcccctttggacccatagtgaccgtctactcc
gctgaagaggagccagtgcgaacgcccaacagagtccgtgccaagagcctgtcggcgtca
gaagtggaggtgacctggagaggcttgccctggtacacaagcaagaggccggacctgagc
aagaggatcctcggctatgagctgagatactgggagaagacggaaaaagaggagactgcg
agcgtgctgaggacggtgggcaatcagacgacggccatcatccagggcctgaaagggagc
agcacctactgcgtggcggtgcgagcgtacaacacggcgggcacaggaccctcgagcggc
gtcgccaacgtcaccaccaagaagccacctcccagccagcctccacttaaagtcatgtgg
aacacgtcaaactccaagatcatcctgaactgggagcaagtcaaagccctggagaacgaa
tccgaggtcatgggctacaaagtgctctacaaacggaaccggcacagtcggcccagcgtg
atggagaccaacaccacctcggtggagctctcgctgcccatcgacgaggagtacatcatc
cagatcaagcccttcggagagggcggcgagggcagcagcagcagacaaatcaccatcccc
agaatatcaggttccactgctatgggctcagcttccacagtgtccacactgtcggcgctc
agcacaatagcactgtccttcacagcgcggacgtccttatga
DBGET
integrated database retrieval system
