KEGG   Alosa sapidissima (American shad): 121707295
Entry
121707295         CDS       T11137                                 
Name
(RefSeq) homeobox protein AKR isoform X1
  KO
K19553  homeobox protein TGIF2
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:asad00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    121707295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:asad03000]
    121707295
Transcription factors [BR:asad03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain TALE
    121707295
SSDB
Motif
Pfam: Homeobox_KN Homeodomain FTO_CTD
Other DBs
NCBI-GeneID: 121707295
NCBI-ProteinID: XP_041945692
LinkDB
Position
4:complement(32136209..32144801)
AA seq 470 aa
MIGSQYHRGGFRRYCQLPADQPRKLAEIAAALEEERGGETEYSAMSDSDAGEDEGYPLDL
SSGGNGGAGGSGKRRRRGNLPKEAVQVLKSWLFEHRFNAYPSEQEKLSLSGQTNLSVLQI
CNWFINARRRLLPDLLRKDGKDPTQFTISRRAGKAEGRHSSGGSGAGGPSSPESPAAPSL
PALRPSVIRPAPTLDLSLLGNTATAILTGAGCLPGRDGHGHVRALMQVDTQGLLKKEAHP
VHLCDEQSPITTTTHSSSNPSAVTSIPPPSATTTTTSIPTLGTASPTGGLFNTPPPTPPE
LCPSQDFSDLKLLVEAALQRAAEQEHQKRQQQQEKQMAMLPVSVTPSPEPAVKCAQPEPC
IVRASKPEHQTPPAAPTPNRDSSIQLSSLEKPVMPVSVPVFSSHSPLPSALQGGGATVMA
GSPASCQVGTWSVVRGDVRQAATSAAVTASPNATPAVWSHSLHTVSEKVN
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgattggatcccagtaccatagaggagggtttagacgctactgtcagctgccagcagac
cagccaagaaagctggcggagatagctgcagcgctggaggaggaacgaggcggagagacc
gaatattcagccatgtcagacagtgacgcaggtgaagatgagggttaccccttggaccta
tccagtgggggaaacggaggagcagggggctctgggaagcgccgccgtcgtgggaacttg
cccaaggaagcagtacaggttctgaagagttggctgtttgagcaccgcttcaatgcctac
ccttctgagcaggagaagctcagcctctctggacagaccaacctctctgtgcttcagatc
tgtaactggttcatcaatgcacggaggcgcctgctgccagacctgctgcgtaaggacgga
aaggaccccacccagttcaccatctcgcgccgcgccggcaaggccgagggccgccactcc
agcggcggcagcggagccggaggccccagttccccggagagccccgcggccccatcgctc
ccggcgctgcggccctccgtcatccggcccgcccccacgctcgacctcagccttctgggc
aacactgccacggccatcctgactggcgccggctgcctcccgggcagggacgggcacggg
cacgtgcgggccctcatgcaggtggacacgcagggtctactgaagaaggaggcccaccct
gtgcacctgtgcgatgagcagtcccccatcaccaccaccactcactcaagctccaacccc
tccgctgtgacctccatacctcccccctctgccaccaccaccaccacctccattcccacc
ttgggcacggcgagcccgactgggggcctcttcaacacgccacccccgaccccaccagag
ctctgcccctcacaggacttcagtgacctgaagttgctggtggaggccgcgctgcagagg
gctgccgagcaggagcaccagaagaggcagcagcagcaggagaagcagatggcgatgctt
ccggtgtctgtcacgccgtcccccgagccggccgtcaagtgcgcccagcctgagccctgc
atagtcagggccagcaagcccgagcaccagacccccccagctgccccgaccccaaacagg
gactccagcatccagctgagctcgctggagaagcctgtgatgccggtgtctgtgccggtg
tttagctcccattccccactgccctcggccctgcagggcggcggagccacggtcatggcc
ggatcgcctgccagctgccaggtgggtacgtggagcgttgtgcgtggcgacgtcagacag
gcagccacctctgccgccgtcactgccagccccaacgccacaccagccgtgtggagccat
tccctgcacacagtctcagagaaggtcaactaa

DBGET integrated database retrieval system