Alosa sapidissima (American shad): 121707405
Help
Entry
121707405 CDS
T11137
Name
(RefSeq) red-sensitive opsin-1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
asad04030
]
121707405
G protein-coupled receptors [BR:
asad04030
]
Rhodopsin family
Vision
Opsin
121707405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srt
TctB
Motif
Other DBs
NCBI-GeneID:
121707405
NCBI-ProteinID:
XP_041945875
LinkDB
All DBs
Position
4:15568720..15571250
Genome browser
AA seq
357 aa
AA seq
DB search
MAQQWEDAVFAARRRGDESTRESMFTYTNSNNTRDPFEGPNYQIAPRWIYNIATLWMFFV
VIASVFTNGLVLVATAKFKKLRHPLNWILVNLAIADLGETVIASTISVINQISGYFILGH
TCCILEGYTVATCGIAALWSLTIISWERWVVVCKPFGNVKFDAKWASGGIIFSWVWAAFW
CAPPIFGWSRYWPHGLKTSCGPDVFSGPEVPGIQSYMVVLMVTCCFLPLGIIILCYIAVW
LAIRAVAAQQKDSESTQKAEREVSRMVVVMIVAYCVCWGPYTAFACFGAANPGYPFHPLL
AAMPAYMAKSATIYNPIIYVFMNRQFRVCIMELFGKAADDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtgggaggatgcagtctttgctgcgaggagaaggggagatgaatctaca
agggaatcaatgttcacctacacaaattcaaataatactagagatccatttgagggaccc
aactaccaaattgccccacgatggatctacaacatcgctacactttggatgttctttgtg
gtcattgcctctgttttcaccaacggcctggtgctggtggctacagcaaagttcaagaag
ctccgtcaccctctcaactggattttggtcaatctggctattgctgatcttggggaaaca
gtcatagccagcaccatcagtgtgattaaccagatatccggctactttatcctgggacac
acctgttgtattcttgaaggctacactgtggctacctgcggtattgctgctctgtggtcc
ctgactatcatctcttgggagagatgggtggttgtgtgcaaaccctttggaaatgtcaag
tttgatgccaaatgggccagtggaggaattatcttctcatgggtgtgggcagcattctgg
tgtgcacctcccatctttgggtggagcaggtattggcctcatggcctgaagacctcatgt
ggacctgatgtgttcagtggacccgaggtccctgggatccagtcctacatggttgtcctg
atggtcacctgctgcttccttcccctgggtatcatcatcctctgctacattgctgtctgg
cttgccatccgcgctgtagcagcacagcagaaggactctgagtcaacacagaaggctgag
agggaagtgtccaggatggtggttgtcatgatcgttgcctactgcgtctgctggggacca
tatacagcctttgcctgcttcggtgcagctaacccaggatatccattccatcctttgctt
gcagccatgcctgcctacatggccaagagcgccaccatctataaccccattatctatgtc
ttcatgaaccgacagttccgtgtatgcatcatggagctctttggcaaagcagctgatgat
ggatctgaagtctccacatccaaaacagaagtctcgtctgtggcacctgcataa
DBGET
integrated database retrieval system
