Alosa sapidissima (American shad): 121707497
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Entry
121707497 CDS
T11137
Name
(RefSeq) limb region 1 homolog-like protein isoform X1
KO
K25215
protein LMBR1L
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121707497
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
121707497
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Gene cluster
GFIT
Motif
Pfam:
LMBR1
TadE
Motif
Other DBs
NCBI-GeneID:
121707497
NCBI-ProteinID:
XP_041946049
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Position
4:11790473..11814247
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AA seq
502 aa
AA seq
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MSPMDRQWSASLLLSVEGLSHNMASFGGDQRLICIFLFSSLYIVCYLIVTHYRKNAEFAT
DDDEDATVNKIALWLCTFSLSVSVGAVMLLPISILSNEVLHTFPQSYYMQWLNGSLIHGL
WNLVFLFSNLSLVFLLPFAYFFTESEGFAGSKKGVMARVYETAVVLLLLTLLVLGMVWVA
SALLNDTSARESLYDLWEYYLPYLYSCISLSGVLLLLLCTPLGLSRMFSVTGRLLVKPRL
LEDVDDTMSCAIFEEAALSRKLNTEASCWVNVNVDLLRNQFLTIQARRIALEMRRRASPW
QRNLGYPFAMLFLLALTVVCVLIVCFHVLELLFDETALPRGMEDPLLGAASFSMFGSLGA
AVQVILILYLMVSSVVGLYSSPLFSCLLPRAQDTTLTQIIANCVCLLVLSSALPVFSRTL
GITRFDLLGDFGRYNWLGNFHIVFLYNILFAGLTSACLINTLTWAVQRELIRAFGLHKLP
LTVSRSAIPLKLLLANGLSKIQ
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaatggaccgacagtggtccgccagcctcttgctatctgtagaaggactttcc
cacaacatggcatcttttggcggtgaccaaaggttgatttgtattttcctcttctcgtct
ctctacattgtctgctaccttattgtcacacactacaggaagaatgcagagtttgctaca
gatgacgacgaggatgccactgtcaacaaaattgcgctgtggctgtgcacattctcactg
tcggtgtcggtaggggcagtcatgcttctccccatctctatcctgtccaacgaggtgtta
cacaccttcccacagagctactacatgcagtggctgaatggatccctcattcatggactg
tggaatcttgtctttctcttttccaacctctcgttggtgttcttactacccttcgcctac
ttctttacggaatcggaaggctttgctggatccaagaagggtgtgatggcacgtgtgtat
gagactgctgtggtgctactcttgctgacgctgctagtgttgggcatggtctgggtggcc
tcagctctcctgaacgacacctcagcccgagagagcctatatgacctatgggagtattac
cttccatatctttactcctgcatctccctgtctggagtccttctgctgctgttgtgtaca
cctctaggcctgtcccgtatgttcagtgtcaccgggaggcttcttgtaaagccacggctt
ctagaagatgtggatgacaccatgagttgtgccatctttgaggaggccgcgctctcccgg
aaactcaacactgaagcatcttgttgggtgaatgtgaatgtagacctcctgaggaaccag
ttccttaccattcaggcacgacggatcgccctcgagatgaggaggagagcatcaccatgg
cagcgtaaccttggttaccctttcgccatgctgtttttgcttgcattgacggtggtgtgt
gtattgatagtgtgtttccatgtgctggagctgttgtttgatgagacggctttgccccga
ggaatggaggatcctttgctgggagctgcctctttctcgatgtttggatccctgggtgca
gccgtgcaagtcatcctcatcctgtatcttatggtgtcctctgtggtgggtttgtacagc
tccccactcttctcctgtctactcccccgagctcaggacaccacattaacccagattatt
gcaaactgtgtctgcttgctggttctgagttcagccctgcctgtgttctccaggactctc
ggcatcacacggttcgatctgctaggggactttggtcgatacaactggctggggaacttc
cacattgtgttcctgtacaacattctgtttgctggactcacatctgcctgtctcatcaat
acactcacgtgggctgtgcagagagaactcatacgggcatttggcctgcataaactgcct
ttgactgtctcacgctcagccatccctctcaaacttcttttagcgaatgggctctcaaag
attcagtga
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