Alosa sapidissima (American shad): 121707514
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Entry
121707514 CDS
T11137
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04020
Calcium signaling pathway
asad04148
Efferocytosis
asad04218
Cellular senescence
asad04310
Wnt signaling pathway
asad04370
VEGF signaling pathway
asad04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121707514
04370 VEGF signaling pathway
121707514
04020 Calcium signaling pathway
121707514
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121707514
09143 Cell growth and death
04218 Cellular senescence
121707514
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121707514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121707514
Transcription factors [BR:
asad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121707514
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
121707514
NCBI-ProteinID:
XP_041946089
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Position
4:complement(27869228..27887594)
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AA seq
912 aa
AA seq
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MNSVYYEGDPPTSGLPDDMSQGNGQEELDFPHLFLYNPPGNDEDEQGEDPNAHDAQDTLS
PESCLQENHTPYSLESLCESPYHPGAPTTDGLPSLEAELGEFLEHPLRPGGPRIEITYSE
LHPHDHSHTEPLDIGPRPTLTVPGYYESSNYRGDTQCLSPASSNSSTSWSEACSPWTSPC
VSPTALPEICPRLQGLHTAGSPRTSPTTSPRNSITEETFLAGRRSSSPHPGSRSASPKGK
RTYDQYQNPGRVCPRSRSPSPHPDDRYDSGPAGAVAGGPGGFDELELVSSLSGSLPKPVP
TKMVRGSFGGAMYQENHPEGGLHYQHEVKPEPAVSLETYYVISPGWPTQLAHGVCSAPVS
SLPSLEWSLPSSTDQLELRLEVQPKQYHRAHYETEGSRGAVKAPSGGHPVVQLRGYRGHE
PLALQVYIGTADERVLKPHAFYQVHRITGKTVTTSSHERIISGTKVLEIPLDPKDNMKAV
IDCAGILKLRNADIELRKGETDIGRKNTRVRLVFRVHVPQPGGQWVSLQVASQIIECSAQ
RSAHELPAVERQDVDHCSVLGGQQMILTGQNFTSDSKVVFSEKTHDGLQIWEAEATVDRD
KSQASMLFVEIPPYRDNTIYRPAKVNFYVLNGRRKRSQPQHFTYTPLTVPFIKTEPVDDF
QFGQLGCAVSQILGVSPSSRHGHPTTSQMPLDGCGVPVLSTHHHNHHQQQQQAAIHSAYA
DRDPEYQLQCPPVVYRQARSLGSSPVLYQPLLEAGSYPGRMTAGMATQHSHSQGSGIDHL
GMTAGYGARASSGSALAEQHHWVVMSNSFQEAASRFPDAGVVPSVVQPGSYGQVGAVAPS
VPRQSHGHHHHHHHHQQQQQQQQQHQGFQPATGQPSGANPGRVTVKQEYLDHLDDVNDII
RKDMPVLGREHT
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagtctattatgaaggggaccccccaacctcggggctccccgacgacatgtca
caagggaatggtcaagaagaactcgactttccccacctgtttctctacaacccgccagga
aacgatgaggatgaacaaggagaggatccaaacgcccatgatgcccaggacactctcagc
cctgagtcctgccttcaagagaaccacactccctacagcctggagtccctgtgtgagtcc
ccgtaccaccccggggcccccaccaccgatggcctgcccagcttggaggccgagctgggg
gagtttctggagcaccccctgcgccccggtggtccacgcatcgagatcacctactcagag
ctgcacccccatgaccactcgcacacggagcccctggacatcggcccgcgccccacactc
accgtgcccggttactacgaaagcagcaattaccgcggtgacacgcaatgcctgagcccg
gccagtagcaactcatccaccagctggtcggaggcctgctcaccctggacgtcaccctgc
gtgtccccgacagcgctgcccgagatctgtcctcggctgcagggcctccacacggccggc
tcgccgcgcacctcccccaccacctccccgcgcaacagcatcactgaggagaccttcctg
gctggacgccggtcctcctcgccgcaccccggctcccgctcggcctcccccaagggcaag
cgcacctatgaccagtaccagaaccccggccgggtctgcccccgctcccgcagcccctcg
ccccacccagatgaccgctacgactctgggccagccggcgccgtcgctgggggtcccggc
gggtttgacgagctggagctggtcagcagcctcagtggcagcctgcccaagcctgtgccc
actaagatggtgcgtgggagcttcgggggcgccatgtaccaggagaaccatcctgagggc
ggcctgcactaccagcacgaagtgaagccagagcctgccgtcagcctggagacctactac
gtcatctcacctggctggcccactcagttggcccacggcgtgtgcagtgcccctgtgtcc
tcgctgccctccctggagtggtcgctgcccagcagcacggaccagctggagctgcggctg
gaggtgcagcccaaacagtaccaccgcgcccactacgagacagagggcagccgcggagcg
gtcaaagccccatcaggaggacaccccgtcgtccagctgcgtgggtatcgcgggcacgag
cctttggccctgcaggtgtacattggcacagcagacgaacgcgtgctgaagcctcacgcc
ttctaccaggtgcaccgcatcaccggcaagaccgtcactacgtctagccatgagaggatc
atcagcggcaccaaggtccttgagattccactggaccccaaagacaacatgaaagcagtc
attgactgtgcaggcatcctgaaattgcgcaacgctgacatcgagctacgtaagggtgag
acggacatcgggcgtaagaacactcgtgtgcgtctggttttcagggttcacgtgccccaa
ccaggaggacagtgggtctccctacaggtggcctctcagattatagagtgctcagcacag
cgctctgctcacgagctgccggccgtggagcgccaggatgttgaccactgctcagttctg
ggcgggcagcagatgatcctgacgggccagaacttcacctcggactccaaagtggtgttc
agcgagaagacccacgatgggcttcagatctgggaggccgaggccactgtggatcgagac
aagagccaggctagtatgctgtttgtggagatcccgccctatcgtgacaacaccatctac
cgcccagccaaagtcaacttctacgtgctcaacgggagaaggaaacgcagtcagccccag
catttcacatacacccccctcactgtgccgttcataaagacagagccggtggacgacttc
cagttcgggcagctgggctgtgccgtatctcagatcctgggcgtgtctccctcgtcccgt
cacggtcaccctacgacctcccagatgcccctggatggctgcggcgtgccagtcttgtcc
acccatcaccacaaccaccaccagcagcagcaacaggctgctatacacagtgcctatgct
gaccgggacccggagtaccagctgcagtgcccaccggtcgtctaccgacaggccaggagc
ctgggcagcagccccgtgctgtaccagcccctcctggaggctggcagctacccaggccgg
atgaccgctggcatggccactcagcacagccacagccagggctcgggcattgaccacctg
ggcatgacggctggctacggtgccagggcatcgagcgggtcagcgctggccgagcaacac
cactgggtggtcatgagtaacagcttccaggaggccgcctcacgcttccctgatgccggc
gtcgtgcccagcgtcgtgcaaccgggcagttacgggcaggtgggggctgtagcgccgtcg
gtgccacgtcagagccacgggcatcaccaccaccaccaccaccaccagcagcagcagcag
cagcagcagcagcaccaggggttccaaccagccactggacagcccagcggagccaaccca
ggacgggtgactgtgaagcaggagtacctggaccacctggatgatgtcaatgacatcatt
cggaaggacatgccagtcctcggacgggagcacacgtaa
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