Alosa sapidissima (American shad): 121707584
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Entry
121707584 CDS
T11137
Symbol
cntn3b
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-3
KO
K06761
contactin 3/4/5/6
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121707584 (cntn3b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asad00537
]
121707584 (cntn3b)
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
Contactins
121707584 (cntn3b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asad00537
]
Others
121707584 (cntn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_3
C2-set_2
Pur_ac_phosph_N
SWM_repeat
CSLinker
Motif
Other DBs
NCBI-GeneID:
121707584
NCBI-ProteinID:
XP_041946182
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All DBs
Position
4:9087129..9146511
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AA seq
1028 aa
AA seq
DB search
MMLLWKQLVLLSIFGCLAAPAEDVAFRGPSWKLEPTDLILPISSPEQEATLQCQADGNPT
PQYRWSLNGTLIDLRSDYRRRLSGGSLIISSLDRDQDTGVYQCTAYNTWGTIHSQKASLQ
FAYLENFKSQTRNAVNVREGQGVVLLCGTPMHSGELTFAWIFNEYPYFVQQDSRRFVSQE
TGNLYIAKVEPSDVGNYTCVVNNSITKERVLSSPTPLVLRNDGAMGEYEPKIEVHFPDSV
PAAKGSVVKLECFALGNPVPEISWRKTSGDPFPSKVKLRNSNAILEVPRFQQEDAGTYEC
VAENSRGKNTVRGRLSFHAKPHWLQTMMNAALSIEDNLAWECKASGRPKPSYSWLRNGEM
LAAEGRVQIENGVLSIVSLNLSDVGMYQCVAENKHGIIYASAELMVLAAPPSFSKSPLQV
LQKARSGSEVTMECRPQAYPQAISLWKKGNEILQRSERITLFPNGTLKIANVTRRDGGSY
TCIAKNQFGTASAMGRLLITEPTRITVGPSNMEIIVGESIVLPCQIAHDPALDVSFSWAF
NGQLVDFDRDGDHFERVGGSIAGDLMIRNIQLNHGGKYVCLIDTDVEHMSADAILIVKGP
PGPPEMVLVEEITDSTAQLSWTPGRDNGSPITGYVVQARTPFTVGWQAVDTVPEVINGNT
LTATVVGLNAWVEYEFRVVASNSVGMGEPSPPSLKTRTEDAIPDTAPTDVGGGGGTKSEL
VITWEPVPEELQNGEGFGYIIALRPAGSVTWTRAVVSTPGLAKYVLRNDTIPPFAPFDVK
VGAFNKRGXGPFSSVATVFSAEEVPSLAPVRTRGRSVSASDIEVVWEPLRSIPERVLGYE
VVYWEDDTKPDTVGKVRISANYTAVNISGLRGSTQYYLAVSAFNTAGTGSQSQPINATTK
KPPPGQPPLNVKWTLIGSQLTLHWDPVTALETESEVTGYLVLCRRHRHNDVNAITTDQTT
AEITLSANDNYVIEIRSLSEGGVGVGSEPIHIHKLSMGARGSGAARRGSVALSPLLLVTL
CLALSTAS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatgttactatggaaacaacttgtgctgctatcaatctttggctgccttgcagctcct
gcagaagatgtagcttttcgagggcctagctggaagctggagcccactgacctgatccta
cccatcagctctcccgagcaggaggccactctgcagtgccaggccgatgggaacccgact
ccgcagtacagatggtctctaaacggaacgctcattgatctcaggagtgactaccggcgt
cgcttgtctgggggcagcctaatcattagcagtctggacagagaccaagacaccggggta
tatcagtgcactgcctacaacacatggggcactatccacagccagaaagcaagcctgcag
tttgcataccttgaaaacttcaaaagtcaaacgaggaatgcagtaaacgtaagggaaggt
caaggagtcgttttattgtgtgggacacctatgcattctggagaactcacttttgcctgg
atcttcaacgagtacccttactttgtgcagcaggatagtcgtcgcttcgtctcccaggag
acaggcaacctctacatcgccaaagtggagccgtccgacgtgggcaactacacgtgcgtg
gtgaacaacagcatcaccaaagaaagggtgctcagctctccaacccctttggtcttgagg
aacgacggagctatgggagaatatgagcccaaaatagaagttcatttccccgacagtgtc
ccagctgcaaaaggatcagtggtcaagctggagtgctttgctcttggaaacccagtgcca
gagatcagctggaggaagacgtctggcgatccgttccccagcaaagtgaagctgaggaac
tccaacgccatcctggaggtcccccgcttccagcaggaagatgccggcacgtacgaatgc
gtcgccgagaacagccggggcaagaacactgtacggggaagactgtctttccacgccaag
ccccactggctccaaacgatgatgaacgcagccctgtcgatcgaggacaatttagcctgg
gagtgtaaagcgagtggaagacccaagccatcctacagctggttgcgtaatggagagatg
ctagctgcagagggccgagtgcagatcgagaatggcgttctttccatcgtttcattaaac
ctgtcagatgtcgggatgtatcagtgtgtggcggaaaacaaacatggcattatttatgcc
agcgccgagctaatggtgttagctgcacctccgagcttctcgaagagtccactgcaagta
cttcagaaggcgcgctcaggcagcgaggtaaccatggaatgcaggcctcaggcctaccct
caggccatcagtctgtggaagaagggaaatgagattttgcagagaagcgaaaggatcaca
ctctttcccaatggtactttgaaaattgccaacgtgaccaggagggatggaggaagctac
acatgcattgctaaaaatcaatttgggacggctagcgcaatgggaaggttgctaattaca
gagcccaccaggatcactgtgggaccaagcaacatggaaatcattgttggcgagagcatc
gtgcttccctgccagatagcccacgacccggctctggatgtgtccttctcctgggcattc
aacgggcagcttgtggactttgatcgggatggcgatcacttcgagagagtaggcgggtct
attgcaggggatctgatgattcgaaacatccagttgaaccacggcggcaagtacgtctgc
cttattgatactgacgtggagcatatgtcagcggatgccatactgatcgttaaaggcccc
cctgggccccctgagatggtgctggtggaggagatcacagacagcacggcgcagctctcc
tggacacccggccgggacaacggcagccccatcacaggctacgtggtccaggcccgcacc
cccttcaccgtgggctggcaggcagtggacacagtcccagaagtcatcaatggaaacaca
ctgactgccacagtggtgggcctgaacgcctgggtggagtatgagtttcgagtggtggcc
agtaatagcgttgggatgggagagcccagtccaccgtccctaaagacacggaccgaggat
gctatcccggatacagctcccactgatgtcggaggcgggggcggcacaaaatcggaatta
gttataacatgggagcctgtgcccgaggaactccaaaatggcgagggcttcggttacatc
atcgccctgcggccggccggatccgtcacctggacgcgcgctgtcgtctccacgccgggc
ctggccaagtacgtcctgcgcaacgacaccatcccgccgtttgcgccgttcgacgtgaag
gtgggcgccttcaacaagcgcgggnaagggcccttcagctctgtggccactgtgttctca
gctgaggaagtgccgagcctggctccagtgagaaccaggggccggagtgtgtcggcatct
gacattgaagtggtttgggaaccgctgcgctccatccctgagagggtgctgggttacgag
gtggtgtactgggaggatgacaccaaaccagacacagtgggcaaggtgaggatatccgcc
aactacacagcggtgaacatcagcggcctgcggggaagcacccagtactacctggcggtc
agcgccttcaacacggccggcaccggatcccagtcccagcccatcaacgccaccaccaag
aaacccccccctggacagcctccactgaatgtaaagtggactcttattggctctcagctc
accctgcattgggacccagttacagccctggagaccgagtccgaggtcacaggatacctt
gttttgtgccgcagacaccgccacaacgatgttaacgccatcaccactgaccagaccacg
gccgaaataaccctgtcagccaacgacaactacgtcatcgagatacggtcgctgagtgaa
gggggagtgggtgtggggagcgagccaatccacatccacaaactgagcatgggtgcgagg
ggctcgggagcagctcggcgtggcagtgtggccctctcccctctcctccttgtgacgctg
tgcttggcactctccactgcctcctga
DBGET
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