Alosa sapidissima (American shad): 121707607
Help
Entry
121707607 CDS
T11137
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 9-like
KO
K08624
a disintegrin and metalloproteinase with thrombospondin motifs 9 [EC:3.4.24.-]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121707607
Peptidases and inhibitors [BR:
asad01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121707607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
GON
TSP_1
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
TSP1_spondin
ADAMTS_CR_2
TSP1_CCN
Reprolysin_5
Reprolysin_3
Reprolysin_2
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
121707607
NCBI-ProteinID:
XP_041946233
LinkDB
All DBs
Position
4:35792187..35845750
Genome browser
AA seq
1922 aa
AA seq
DB search
MHVLFWGLGFLTVLPDLLIVDASTTGRHLLSSRKANALGAYEIFTPTRVDEAGDRLHTSI
HFKRKKRSIDSAADNSVDQWASPTIHYRISAFGQNYELNLTLESGFIAPLYTVTILGLPN
SGNLTEFSQEGEEEETDYQHCFYRGHVNADPEHTAVISLCSGLLGTFRSPEGEYFVEPLH
SYNGVHYEEEHNKPHIVYRKDTPKKAGREEEACETSGHKKRHRRHKDQAKKRPPTGMQAD
LESLSTGLFGDAFPLSENKHAANDSSDSGPHRRSKRFLSYPRFVEVMVVADSKMVEHHGS
NLQHYILTLMSIVSSIYKDPSIGNLINIVIVKLVIINNELDGPVVSFNAQTTLKNFCIWQ
QGQNHPDDNHPSHHDTAILITRQDICRARDKCDTLGLAELGTVCDPYRSCSISEDNGLST
AFTIAHELGHVFNMPHDDSNKCKEDGVKNQQHVMAPTLNYYTNPWMWSKCSRKFITEFLD
TGYGECLLDEPISRPYSLSQQLPGRIYNVNKQCELIFGPGTQVCPYMTQCRRLWCTSPEG
AQRGCRTHHMPWADGTDCSPGKHCKHGLCIAKEHDATPVDGAWGAWSPFGTCSRSCGGGI
KIALRECNRPVPRNGGKYCVGRRMKFRSCSSEPCSKVKKDFREEQCATFDGRHFNINLLP
PNVRWVPKYSGILMKDRCKLFCRVAGSTAYYQLRDRVIDGTPCGPDTNDICVQGLCRQAG
CDHVLNSKARRDKCGVCGGDNSSCKPMQGTFNTVHYGYNVVVRIPSGATNIDVRQHSYSG
KPEDDNYLAVSDSRGEYLLNGGFVVSMFKREIKLGSAVLEYSGSDHVIERLNCTDRIEEE
IIVQVLSVGNLFNPDVRYSFNIPIEDKPQQFFWDAYGQWQECSRLCQGERKRKILCSRES
DRVVVSDQRCHGSARPSAITEPCNTECELRWHTARKGECSAQCGLGYRTLDIYCAKHSLA
DGKTQKVDDRYCNQRKPDDKEGCHGDCNPGGWEYSPWSECSKSCGGGTRRRGAVCGKAAE
VGGDESKCNQRDKLTAQPCNEFQCPQWTTGDWSECLVTCGKGYKHRQTWCQFGEDRLDDR
FCDSSKPESVQTCQQQECASWQVGPWGQCTTSCGPGYQMRAVKCVVGSYGSVMDDTECNA
ATRPTDTQDCELALCPVAHPVSPDTKGPSHPGHKTQWRFGSWTQCSASCGKGTRMRYVSC
RDNQGGVAEESACAHLPRPTAREVCQVVACGQWKVLEWTPCSVSCGQGKATRQVVCVNFS
DQVVDVSECDPDDRPAREQECAMPQCPSRPTDHGSFPAIPKSVPPAGGSDSRRGRNQWRT
GPWGACSSTCAGGFQRRVVVCQDENGYTANNCDESSQPNEQRSCESGPCPQWVYGNWGEC
TKSCGGGIKTRLVACQRPNGERFNDLSCEILDKPPDREQCNTQSCPSNPHWSADPWSSCS
ASCGRGYKYRNVTCVSRSKRPIPEENCQHLPRPNKQRRCRGGRCPKWKASSWGECSTTCG
NGIQQRDVFCQFGDQRRVDESECARFPARPPSSQTCRPADCPSPYRWSVGEWRPCSRTCG
SGHRRRPVHCLDDSGEEVHDMYCVTQTKPTDSEACNTQACEFIWVTGEWTECSVTCGQGY
QRRLVSCSEVHSGNDNYEYGHQSSSNCPGTPPESILECHAEPCPPQEAWRVGMWGPCSVT
CGEGWMERTLQCVTAEGEASDRCPVSARPQARKACGNPSCHLPRSCREAQSLSSILVDGE
QILSVQGKAVKIYCAGMQTDTPGEYVTLMAGEAENFSEVFGYRLIDPTGCPANLSRREDC
SCRRDYTAAGLSTFSKVRLDLSKMHIITTDWQFAVTREGRHVPFATGGDCYSAARCPQGR
FSINLSGTGFHVAEQTKWISHGNYAVADIHKSQDGSRVTGMCGGYCGKCTPSTSSGLLVR
VT
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgctcttctggggtttaggatttcttacagttctccctgacttgttgattgtg
gatgcatcaacaacagggagacatttgttgagctcaagaaaagcaaacgcactcggtgca
tacgagatttttactccaacaagagtggatgaagctggtgacagactacatacaagtata
cacttcaaacggaaaaagcggagtattgattcagcagcggataacagtgttgatcagtgg
gcctcaccgaccatccattatcgaatttctgcttttggacagaattatgaactcaacctc
acacttgagtcgggatttattgcgccactttacactgtcacgatactcggactaccaaac
agtggtaacctaacggaattctcacaagagggggaggaggaggagacagactatcagcac
tgcttctaccgaggacatgtgaatgcagacccggagcacaccgcagttatcagcctctgc
tccggtttgcttggcactttcaggtcaccagaaggggagtattttgtggagccccttcat
agctacaatggtgtacattatgaagaagaacacaacaaacctcatattgtgtatagaaag
gatacccccaagaaggctgggagggaggaggaagcatgtgagacttcaggacacaaaaag
agacacaggcgacacaaagaccaggcgaagaagaggcctcccaccggcatgcaggctgac
ctggagagcctgagcactggactcttcggcgatgccttccctctgagcgaaaacaagcat
gcggctaatgacagcagtgattcaggacctcacaggagatcaaagcgcttcctctcctat
ccgcgctttgtagaagtcatggtggtggcagacagcaagatggtggaacaccacggcagc
aaccttcagcactatattctcaccctcatgtccattgtatcctccatatataaggatcct
agcattggaaatctgattaatatcgtcattgtgaagttagttatcataaacaatgagctg
gacgggcccgtggtgtctttcaatgcacaaaccactttaaaaaacttctgcatatggcag
cagggtcaaaatcaccctgacgacaaccacccctcgcatcacgacacagcaatcctcatt
actaggcaagacatctgtcgtgcacgtgacaaatgtgataccttaggtcttgcagagctg
ggcactgtttgtgacccatacagaagctgcagcattagtgaggataatggacttagcacc
gctttcaccatcgcgcatgaactaggccatgtgttcaacatgccccacgacgacagtaac
aagtgcaaggaggacggagtgaagaaccagcagcacgtgatggcgcccacgctcaactac
tacactaacccctggatgtggtccaagtgcagccgcaaattcatcaccgagttcctcgac
acagggtatggagagtgcctactggacgagccaatatctcggccatacagcctgtctcag
cagctgcctgggcggatatacaatgtcaataaacaatgtgaattgatatttgggccagga
acacaggtgtgcccatatatgacacagtgccgcaggctttggtgcaccagcccggaggga
gcgcagcgcggctgccgcacccaccacatgccctgggcagacgggaccgactgctcccct
ggcaagcactgcaagcatggcctgtgcatcgccaaagagcacgacgccacgcctgtggac
ggtgcctggggtgcgtggagcccgttcggaacgtgctctcggtcctgcggcggtgggatc
aagatcgccttgcgggagtgcaaccgacccgtgccgaggaatggggggaagtactgcgtg
gggcggcggatgaagttccgctcctgcagctcagagccctgctccaaggtgaagaaggac
ttccgcgaggagcagtgcgccacgttcgatggcaggcacttcaacatcaaccttctacct
ccaaacgttcgctgggtgccaaaatacagtggaatcctcatgaaggatcggtgtaagctg
ttctgccgggtggctgggagcacggcctactatcagctcagggaccgggtcattgacggt
accccatgcgggccggacaccaacgacatctgcgtacagggcctctgcagacaagccggg
tgtgaccacgtgctcaactccaaggcaaggagggacaagtgtggtgtgtgtggaggggac
aactcctcgtgcaagcccatgcagggcacgttcaacaccgtgcattacggatacaacgtg
gtcgttcgaatacccagtggtgctacaaacattgacgtccgacaacacagctactcaggg
aaaccagaggatgacaactacctcgctgtttctgacagtcgtggggagtatttgctcaac
ggagggttcgtggtcagcatgttcaaaagggaaatcaagctgggcagtgctgtccttgag
tacagtggctctgaccacgtcatcgagagactcaactgcactgatcgcatcgaggaggag
atcatagtccaggtgctatctgtggggaacctgttcaacccagacgtcaggtattccttc
aacatccccatcgaggacaagccgcagcagttcttctgggatgcctatggacaatggcaa
gaatgtagcaggctttgccaaggggagcgcaagaggaagatcctgtgcagccgcgaatcg
gaccgggtggtggtgtctgaccagcggtgccatgggtcagcccggcccagcgccatcacg
gagccctgcaacaccgagtgtgaactcaggtggcacactgctcgtaagggtgagtgcagc
gctcagtgtggcctgggctaccgcactctggacatctactgtgccaagcacagcctggcc
gacggcaagactcagaaggtggatgaccggtactgcaaccagcgcaagcccgacgacaag
gagggttgccatggggactgcaaccctggcggctgggagtactccccatggtcagagtgc
tccaaaagctgtggtgggggcacgcgtcggcggggggcggtgtgcgggaaggcagcagag
gtcggcggggacgagagcaaatgtaaccagagggacaagctcaccgcccagccctgtaac
gagttccagtgcccgcagtggacgaccggcgactggtcagagtgtttagtaacctgcgga
aaaggatacaagcaccggcagacctggtgtcagttcggagaggaccggctggacgaccgg
ttctgcgactcgtctaagccggagtcggtgcagacgtgccagcagcaggagtgtgcctcg
tggcaggtcggaccgtgggggcagtgcaccacctcgtgcggaccgggctaccagatgagg
gcggtgaagtgtgtggtggggtcgtacgggtccgtcatggacgacacggaatgtaacgcg
gccaccaggcccacggacactcaggattgtgaactagctctgtgcccagttgcccatcct
gtttcaccagacaccaaaggcccttctcatcccgggcacaaaacccagtggagatttgga
tcgtggacacagtgcagcgcctcttgtggcaaaggaactcggatgcggtatgtgagttgt
cgtgacaaccagggaggagtggccgaggagtctgcctgcgctcaccttcccaggccaacg
gcgcgggaagtttgccaggtggtggcatgcggccagtggaaggttctggagtggacgccg
tgctcggtgtcctgcggccagggcaaagccacccgccaggtggtgtgtgtgaacttcagc
gaccaggtggtggacgtgagcgagtgcgacccagatgaccgtccagcccgcgagcaggag
tgcgccatgccccagtgcccctcgcggcccactgaccacggctccttccccgccattccc
aagagcgtgccgccggccgggggcagcgacagcaggagaggccgcaaccagtggagaact
ggtccttggggagcgtgctccagcacgtgtgccggtggcttccagaggcgggtggtggtg
tgccaggatgagaacggctacacggccaacaactgtgacgagagctcccagccaaacgag
cagcgctcctgcgaatctggaccctgcccgcagtgggtctatggcaactggggagagtgt
acgaagtcctgtggcggtgggataaaaacacggctggtcgcatgtcagcggcccaacggg
gagcgctttaacgatctgagctgtgaaattcttgacaaaccgcccgaccgagagcagtgc
aatactcagtcgtgcccgtctaacccccactggagcgcagacccgtggagctcgtgctcc
gcctcctgtggaaggggatacaagtaccggaatgtgacgtgcgtcagtcggtccaagcgg
ccaatcccggaggagaactgccagcacctgccccgccccaacaagcagaggagatgccga
gggggccgctgccccaagtggaaggccagcagctggggcgagtgctcgacgacatgtggc
aacggcatacagcaacgagacgttttctgtcaatttggagaccaacgccgcgtggatgag
tcggaatgcgcaagattcccagctcgcccaccctctagtcagacctgtcgtcccgctgat
tgcccgtcgccgtacagatggagcgtcggagagtggcgaccatgcagtcggacatgtggg
tcaggccaccggagacgaccagtgcactgcctggatgacagcggggaggaggtccatgac
atgtactgcgtcacccagaccaaacctacagactctgaggcctgtaacacccaggcctgt
gaattcatctgggtcacgggggagtggacagagtgctcagtcacctgtgggcagggatat
cagaggaggctggtctcctgcagtgaggtgcattctgggaatgataattacgagtacggg
catcagtcttcgtcaaactgccccgggactccgccagaaagcatcctggagtgccacgct
gagccctgtcctcctcaagaggcctggagggttggcatgtgggggccgtgttcagtgacc
tgtggggagggctggatggagcgcacgctgcagtgtgtaacagcagaaggggaagccagc
gacaggtgtccggtgtctgccagaccccaggcacgcaaggcctgcggcaacccttcctgc
cacttgccaaggagctgcagagaggcccagagcttgagcagcatcttggtggacggggaa
cagatactgagtgtgcaagggaaagcagtcaagatctactgtgctggaatgcagacagat
actccaggggaatacgtcaccctgatggctggcgaggcggagaatttctctgaggtcttc
ggctacaggctgattgacccgactgggtgccctgccaacctgagccgaagagaggactgc
agttgcagaagggactatacggcagccggcctctccaccttcagcaaagtccgactggac
ctcagcaagatgcacatcatcaccacagattggcagtttgccgtcacgcgagagggccgc
cacgtgccgtttgccactggaggggactgctacagcgccgcccgctgtccacagggccgc
ttcagcatcaacctctcagggacaggctttcatgtggccgagcagaccaagtggatttcc
catggaaactacgctgttgcagacatacacaagtcgcaggatggcagtagagttacagga
atgtgtggtggctattgcggcaaatgcaccccttcaacaagctctggccttcttgtgcgt
gtcacataa
DBGET
integrated database retrieval system
