Alosa sapidissima (American shad): 121707624
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Entry
121707624 CDS
T11137
Symbol
ccdc39
Name
(RefSeq) coiled-coil domain-containing protein 39
KO
K23729
coiled-coil domain-containing protein 39
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121707624 (ccdc39)
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121707624 (ccdc39)
Cilium and associated proteins [BR:
asad03037
]
Motile cilia and associated proteins
96 nano-molecular ruler
121707624 (ccdc39)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
Other domain-containing proteins
Others
121707624 (ccdc39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC39
PUMA_CC
DUF1664
Fez1
DUF6212
Gal4_dimer
Motif
Other DBs
NCBI-GeneID:
121707624
NCBI-ProteinID:
XP_041946253
LinkDB
All DBs
Position
1:complement(46656158..46670734)
Genome browser
AA seq
947 aa
AA seq
DB search
MSDALLSEVGWDEGFAIPVANAENKALEDELQRKQRDKTILENKLAEYKDRINAMTEHLK
NVKQELSHTQALCKAREKETDTEKHFKALAEREMGRLQQEIAQLEKELGSLRERHTAQEN
SIFKTTQTLEELSNRLNWDQKTLDAWLDESARRDEDTMAILKYAQQDESQIKELTLNIEK
LNLQANQKRKALDNELTETITAQIGLDKTAENFRQVHAERQELICQWESTIEQMKKRDQE
MQDCAAMITKVNQDIRERHSVIKEKTAFLESEVENNKEYEKKIGAAERQAAKLRQQFQEQ
EENRTRLHDELESLKSIVDRAASDVENVRAQIASMKKDIEDKSTKVKDAKLHNAALEEKL
ASVTEATMSVEERAAQMEQLLKEEEQNIKEVDLLLHRHREAVFRKNQELQALRLKEKDSV
SEVSGSKAAITNLDSRIRKVDQNTLKQQEIIYSQDFQIQLLERKMSRLQGEVNTEEKQAL
EKRVEELSDTLEERRKTTTMLTTQLKKLQDDIRCVRKEMEKTGAEKRNLTTKIEELNLFN
DTSDKELKKLRLKKQDTMVEDNILKLEIKRLRDLLYDKADRVLSLEKRRLQLQTAMGERE
EEIRVHGEMLTKQFRITDQERQALSAEVHERMSKIDKMRKKYEILTMQGPEGEEEKSQAF
YVIKAAQEKEELQRQGDTLDAKIRKAEKEVLALENTLHVVNSRNHTYRKSFNRVTESSEE
YQEKLKLEGEKRAAEDKYRLKRCQIKELQEDIQSMNNTLEILLQEETEQNGRTDETQSRI
LSLNMELASQKEKLDRVNKQCTKLTKEIRSTKQTTEKTFEERDVQLRELKDLNKKVNHML
LEAMDRSPDLESALVMYFTQANLLLPSPGSAPGSRQGSKATSARSSASVRSSGSSASSSP
RGLALQSPPVKTLELGLGLSVTSPPLATTSPQSSRPSSSRIAQRKSP
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgcttttatccgaggttggctgggatgaaggctttgccattcccgttgca
aatgcagaaaacaaagccttggaggatgagcttcagaggaaacaaagggacaagacaatc
ctggagaataaactggccgaatataaggacaggattaacgccatgactgaacatctgaaa
aatgtcaaacaagagttgtcacacactcaggcactgtgcaaagctagggaaaaagagact
gacacagagaagcattttaaagccctggctgagagagagatgggccgtctgcaacaggag
attgcgcagctagagaaagagcttggctcattaagggagaggcacactgctcaagagaac
agcatattcaaaaccactcaaacactggaggagctgagcaaccgcctgaactgggaccag
aagactctggatgcctggctggatgagtcggctcggagggatgaggacacgatggccatt
cttaaatatgcccagcaggacgagagtcaaattaaagagctgacactaaacattgaaaag
ttgaaccttcaggccaaccagaaaaggaaggcccttgacaatgaacttactgaaacaata
acagcacaaattggattggacaaaactgctgagaacttccgccaggtccatgctgagagg
caagagctgatctgccagtgggagagcaccattgaacagatgaagaaaagggaccaggag
atgcaggactgcgcagcgatgatcaccaaagttaatcaggatatccgagaaaggcactcg
gtgatcaaagagaagacggcctttctggagagcgaggtggagaacaataaggagtatgag
aagaagatcggtgcggctgagcggcaggcggccaaacttaggcaacagtttcaagagcag
gaggagaaccgcacacggttgcatgatgagttggagagtctgaagagtattgttgaccga
gcagcgtcagatgtggagaatgttcgagctcaaatagccagcatgaaaaaggacatcgag
gacaaatccaccaaagtgaaggatgccaagcttcataatgcagccctggaggagaagctg
gcgtctgtaactgaggccaccatgagtgtggaggaacgtgctgcccagatggagcagctg
ctaaaggaggaggagcagaacatcaaggaggtggacttgctgttgcatcgccatagggaa
gcggtgttccgcaaaaaccaggagcttcaggccctgcgcctgaaggagaaggactcggtc
agcgaggtatctggcagcaaagccgccatcactaacttggacagcaggattcgcaaggtg
gaccagaacactctcaagcagcaggagatcatatacagccaggacttccagatccagctg
ctggagaggaagatgtcccggctgcagggggaggtgaacacggaggagaaacaggccctg
gagaagagggtggaggaactgagtgacacgctggaggagaggaggaagaccaccaccatg
ctcaccacacagctcaagaagctccaggacgacatccgctgtgtgaggaaggaaatggag
aagacgggtgcggagaagagaaacctgaccacaaagatcgaggagctcaatctgttcaac
gacacttcagataaagagctcaagaaactccgactcaagaagcaggacactatggtggag
gacaacatcctgaagctggagatcaagcggctgagggacctgctgtatgacaaggctgat
agggtgttgtccctggagaagcgccggctccagctgcagacggccatgggcgagcgcgag
gaggagatcagggtccacggcgagatgctcaccaagcagtttaggatcactgaccaggag
cgccaggctctcagtgctgaagtgcacgagaggatgtccaaaattgacaagatgaggaaa
aaatatgagatcttaaccatgcagggcccggagggggaggaggagaagtctcaggctttc
tacgtcattaaggcagcccaagaaaaagaggagcttcagcgccaaggtgacaccctcgat
gccaaaattcgcaaggctgagaaagaggtccttgctcttgagaacaccctccatgtggtg
aacagccgcaatcacacataccgcaagtccttcaacagggtcactgagtccagtgaggag
taccaagagaaactgaagctagaaggagaaaaaagagcagctgaggacaagtacagatta
aagagatgccagatcaaagaactccaggaggacatacagagcatgaacaatacccttgaa
attcttctacaagaggagacggagcagaatgggaggacagacgagactcagtcacgcatc
ctttctctgaacatggaactggcctctcagaaagagaaactcgatagggtcaacaaacag
tgtacaaagctcacaaaagagatccgctcaaccaagcagaccacggagaagacgtttgaa
gaacgggacgtccagctccgagagcttaaggacttgaacaagaaggtcaaccacatgctc
ctggaggccatggaccgcagtcctgatctggaatcggctctagtgatgtacttcactcag
gccaatctgctcctgccgtcccctggatctgctccaggcagccgacagggctccaaggcc
acctccgctcgcagctctgcctccgtcaggtcctcaggctcctcagccagcagtagcccc
cggggcttagctctgcagtctcccccagtcaagaccctggagctgggcctgggtctgtct
gtgacctcccctcctctggctacaacgtccccacagagttcccgaccatccagcagcagg
attgcacagcgcaagagcccttag
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