Alosa sapidissima (American shad): 121707671
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Entry
121707671 CDS
T11137
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4 isoform X1
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04020
Calcium signaling pathway
asad04148
Efferocytosis
asad04218
Cellular senescence
asad04310
Wnt signaling pathway
asad04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121707671 (nfatc4)
04020 Calcium signaling pathway
121707671 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121707671 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
121707671 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121707671 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121707671 (nfatc4)
Transcription factors [BR:
asad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121707671 (nfatc4)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
121707671
NCBI-ProteinID:
XP_041946313
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Position
1:45977441..45990413
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AA seq
905 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDQTRGPSPLRNADRDPSSVGERTERAPAHLETSNSTDT
STHIGQPLGIPSPPNSTSQRAGMHSPPPRRALVREFSGTYESLPARSIQVSESRVLECPS
IQITTISPEDDSALAGGGYWDTGGGWDRERLYLPLLDPFCYRDGMTGAGSLSPSPASSPS
SRGWLSPASSCDSLLAEEEELNEATSHFCLSPSSRPTSPGGKKRRNSPCASPCTSRRGSY
SEEHPSALETGQGDPQSQAPGGGCELNIPQKTRKTSLEQVSSRELEQDHAPPAQSSPCPL
PEPRGLRRELPSLGMNYLSVPPALGWGRTRASAHSPLFRSNALPPLDWPLPSQFDQYELR
IEVQPRPHHRAHYETEGSRGAVKASPGGHPLVKLVGYTERQPLSLQVFVGTADDRSIRPH
PFYQIHRVTGKMVGTASQESIQAGTKLLDIPLNPETNMTALIDCAGILKLRNSDIELRKG
ETDVGRKNTRVRLVFRTHIPLAPPLAPPGRVLALQVASLPIECSQRSAQELPVVESASLA
SCSVEGGEELLLGGSNFLPTSRVLFMERGSDGKLQWEEEAHIDHDKSNECLLCVRVPPYS
DQSVSRPVPVCLYVSNGKRKRSSTHCFKYLPSESIMFKEEDPLLSHPSVLPLEGVGLGPF
GGSGVSDRGLHLRGDTPMDERGLGFHLPPYPSDFSYSGQNYQEEYCSKPEGQEESGGGGG
GGGRGALSERQPSFESLELGFTELLPPLYPRGVAQPPSPSPSPWLDSPYLSSSPSPSHSS
SLSPFPASSPISTSPLPPLPHSPYHPSCPYPQEVCPCPCPSPPANHGLPQDLYPPPPYSQ
YEGWETHGRGVPDREPAGGMKMQEGPLEFASSSSMHHITLEEVTEFIGEDIRSFQSGPHM
ESRPG
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgcgccgggctcgggctgggaagagggggagttcgagttcaagttggtgttt
gaggaggatcagacccgcggcccatccccgctgcgcaacgccgaccgggaccccagctct
gtgggggagaggacggagagagcccccgcgcatcttgaaacaagcaacagcactgatacc
tccacacatatcggccagccattgggcatcccgtcaccacccaactccaccagtcagagg
gccgggatgcattccccacccccacggagagcgctggtgcgggagttcagcgggacgtac
gagagccttcctgcacgatccatacaggtgtctgagtccagagttctcgagtgccccagc
atccagatcaccaccatctccccagaggatgactcggcgctggccgggggaggttactgg
gacaccggtggcggttgggacagggagcgcctctatctgccactgctggaccccttctgt
taccgtgacggcatgacgggggcggggtcactcagccccagccccgcctccagcccgtcc
tcccgcggctggctcagcccggcctccagctgcgattcgctgctggccgaggaggaggag
ttgaacgaggccacctcccacttctgcctgtcgccctcctcccgccccacctcccccgga
ggcaagaagcgtcggaactccccctgcgcctccccgtgcacctcgcgccggggcagctac
tccgaggagcacccatccgccctggagacggggcagggggacccccagagccaggcgccg
ggcggaggctgtgagctcaacatcccccagaagaccaggaagacctccctggagcaggtc
tcctccagagagctggagcaggaccatgcccctcctgctcagagctccccgtgtccgctg
ccagagccacggggcctgaggcgggagctcccctctctgggcatgaactacctgtccgtg
cctcctgctctgggatggggcaggaccagggctagtgcacatagccctctgttcaggtca
aacgccttgcctccacttgattggccactcccctctcagtttgaccagtacgagctgcgt
attgaggtgcagcctcgcccacatcatcgcgcccactatgagacagagggcagccggggt
gcggtcaaggcatcgccaggaggtcatcctctcgtgaagcttgttgggtacacagagaga
cagccgctctccttacaggtgtttgtgggaaccgctgatgaccggtccatacgaccacac
ccattctatcagattcaccgagtcacagggaaaatggtcggcactgccagtcaggaaagt
atccaggctggaactaaactactggatatcccactcaatccagagactaacatgactgct
ttaattgattgtgcgggcattctgaagctgaggaattccgacatagaactcaggaaagga
gagactgacgtcgggagaaagaacacgcgtgtccgtctggttttccgcacacacattccg
ctggctccaccgctagctccacccggacgggtgctcgccttgcaggtggcgtctctgcca
atcgaatgctctcagcgctcggctcaagagctgccggtggtggagtcggcgagcctggcg
tcgtgctccgtggagggtggagaggagctgctgctgggaggctccaactttctgcccacc
tcccgggtgctctttatggagagaggttcagatggaaaactacagtgggaagaagaggct
cacatagatcatgataaaagtaacgagtgcctgctgtgtgtgcgagtgccaccctacagt
gaccaatcagtgagtcgccctgtaccagtctgcctgtacgtgtccaatgggaagaggaaa
agaagcagcacccactgtttcaaatacctgccaagtgagtccatcatgttcaaagaggag
gaccccctcctgtcccatccctcagtgctgcccctggagggggtgggcctggggcccttt
gggggctcgggggtgtcggacaggggcctgcaccttagaggggacacccccatggacgag
cgaggtctgggcttccacctgcccccgtaccccagtgacttctcttactcagggcaaaac
taccaggaggagtactgctccaagcccgagggccaggaggagagcggaggtggaggtgga
ggtggaggtaggggggctttgtctgagaggcagcccagctttgagagcctggagctgggc
tttaccgagctcctgccccccctgtacccccgcggcgttgcccagcctccatcaccctct
ccctcgccgtggctggactccccgtacctgtcgtcctcgccgtccccgtcccactcctcc
tccctcagccccttccccgccagcagccccatctccacctccccgctgccccccctgccc
cactcgccctaccaccccagctgcccctacccccaggaggtgtgcccctgcccgtgcccg
tccccaccggccaaccatggcctccctcaggacctctacccaccacccccctacagccag
tacgagggctgggagacgcatggcaggggggtcccagatagggagcccgcagggggcatg
aagatgcaggaaggacccttggagtttgccagctcctcatccatgcaccacatcacactg
gaggaggtcactgagttcattggggaagacatcagatctttccagtctggtccacacatg
gagagcaggcccggatga
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