KEGG   Alosa sapidissima (American shad): 121707673
Entry
121707673         CDS       T11137                                 
Symbol
per3
Name
(RefSeq) period circadian protein homolog 3 isoform X1
  KO
K21945  period circadian protein 3
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asad03400]
    121707673 (per3)
DNA repair and recombination proteins [BR:asad03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    121707673 (per3)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 121707673
NCBI-ProteinID: XP_041946321
LinkDB
Position
4:20322325..20369477
AA seq 1329 aa
MSGEKEGGGARDGEGDSAPADEEQQEVEREEHSGSEKEEVSESSGAPRSDDQRGVTVAKM
TAPPTDGEQGQSDVSGGEQGQDDVEMNTCHDSNSGNEASADGAKKGGGGAKKAGRSKHHH
SHSSTTGSSSSKSSKSATRSSFCGSSQHTETSGGSEPTEPGREQKHKEMMQTVQEMKKRI
PSERRSRSKPSTVEALLYALNCVKQVQANSEYYKLLMSHSQKERCDATVCLLEELDSITS
EHALKNTDSFVVVFSLTTGRVVYASEQASSILNCKRRFLESAKFVELLYHQDVNVFYSHT
AQPHLPPWNVGSDSNAILYECAQVKSFFCRIRGGKDRDGEMRYNPFRITPYLLKVQGLDE
TEQQPCCLALAERIISGYEAPRIPMDKRIFTTTHSPGCVFLEVDDRAVPLLGYLPQDLIG
TSLLSCLHPEDRALMPAMHRKILKYAGQPPFEHSPLRFRCQNGDYVTLDTSWSSFINPWS
RKVAFIIGRHKVRTSPLNEDVFAERCKSEMPVICEDIKVLQAVIYKLFLQPVHNNGSSGY
GSLGSNGSHEHYKSVASSSDSNGNLWEDSHREPMTLQQICADVNKVKNWGRQAYLDSRSK
LTPLGKPAIEPRVPHTPAAQNTGVRGHVEQSLEESRKQPHIPSYQQINCVDSIIRYLESC
TTPGLKRKSESHSLATSSSSSSSSSSSSEEDKALTAPSEDVTNPNAGTLDSQVSAVSAVT
VAHTTAAVVGAPLTDIDLSTKAMSVVSVTSQCSYSSTIVHVPQPESEVTALEDAPMGSEP
TDQTPAPARPTPSSAAAEEFRMVGLTKEVLSAHTQKEEHEYVDRFRHRILQSPYSSYLQQ
DTGSLAHSHHRGDYVMQPVSAGGFKSKSGKPKHKRPKPQDSSDSHGSTPRPSRRPPNPPH
SSWPSSESSHPQHAAAGGYPMPPPLVMPLQPSGPFYSAEGDQMGGPKQGDVPVGAIPMMP
QPDPAFQQMQQTAQGLNPYMTPVMAVILPNFPTYPPGYPMFQQAQPLAPFNMAAYAPMAP
TLFSPNTLVNQQQQQPPLGIPVPPVPPVPSSPQPWLGEEDLDEAQPPALFSSSRSSSPLQ
LNLLQEELPKPAEPQSSTGRPESLHEQHNKGEDAPSESGNQDALSTSSELLDLLMQEDAR
SGTGSNASGSGSGESGGSLGSGSGSGSNGTSTSHTGSSNSSKYFASNDSSDTSRKARKSQ
EAPEHVHFEHAAVQDSLWTMIQHTPETVMMNYQMLPRDQTQVLKEDQEKLRLLQPLQPWF
TQEQREELAEVHPWIQQHGIPQEIDTQGCVICSTMDAGPGSPRSPSPPTPVSSVPQEETP
QEPSTAPNT
NT seq 3990 nt   +upstreamnt  +downstreamnt
atgagcggagagaaggagggtggcggggccagagacggcgaaggtgactctgccccggcg
gacgaagaacagcaagaggtcgagcgcgaggagcactcgggctctgagaaggaggaggtg
agtgagagcagcggtgcgccgagaagcgatgaccagagaggggtcacggtagccaagatg
acggcgccccccaccgacggagagcagggccagagtgacgtgtccggcggggagcagggt
caggatgatgtggaaatgaacacctgccatgactccaacagcgggaacgaggccagtgcc
gacggggccaagaagggcggaggtggcgcgaagaaggccgggagatccaaacaccatcac
agccacagcagcaccacgggctccagcagctccaagagctccaagtctgccacaagatca
tccttctgtgggagtagccaacacacagagaccagtggaggaagtgagcccacagagcct
gggcgcgaacaaaaacacaaagagatgatgcagacggtccaggagatgaagaagaggatt
ccctcggagaggaggagccgcagtaaacccagcacggtggaagcactcctctacgccctc
aactgcgtcaaacaagtacaagctaacagtgagtattacaagctgctgatgagtcacagt
cagaaagagcgctgtgacgccaccgtgtgtttgctggaggaactggacagcattacctca
gagcatgcactgaaaaatacggattcgttcgtggtggtgttctccctgaccactggtcgg
gtggtgtacgcctcagagcaggcatccagcatcctcaactgcaagcgccgcttcctggag
tcggccaagtttgtggagctgctctaccaccaggacgtcaacgtcttctactcccacacg
gcacagccccacctgcccccctggaacgtgggctcagatagcaatgcaattttgtatgaa
tgtgcccaagtgaagtccttcttctgcagaatcagagggggtaaagatcgtgacggggag
atgcgttacaacccattccgcatcactccgtacctgttgaaggtgcagggcctggacgag
actgagcagcagccctgttgcctggcactcgctgagcgcatcatctcaggatacgaggct
cctcgaatccctatggacaagcgtatctttaccaccacacattccccaggttgcgttttc
ttggaggtggatgaccgtgctgtgcctttgcttggatacctccctcaggacctgattggc
acgtccttgttgtcttgtcttcaccctgaagaccgtgcactgatgccagccatgcaccgc
aagattctcaagtacgctggtcagcccccctttgagcactcccctctccgctttcgctgt
cagaacggggactatgtgacactggacaccagctggtccagcttcattaatccatggagc
cgcaaggtggctttcatcatcgggaggcataaagtgcgcactagtccactgaatgaggac
gtgtttgctgagcgctgcaagtccgagatgccagttatctgtgaggacatcaaagtgctt
caggcagtcatatacaagctgtttttacagcccgtgcacaacaacggctccagtggctac
ggcagcctgggtagcaacggctcccacgagcactacaagagcgtggcgtcgtccagcgac
agtaacggcaacctgtgggaggactcccaccgcgaaccgatgacactacagcagatttgt
gccgacgtcaataaggtgaagaactggggccggcaggcttacctggactcccgcagtaaa
ctaactcccctggggaaaccggccatagaaccacgggtgccccacactccagctgcccag
aacactggggtcagaggtcatgtggagcagtctctggaagaatccaggaagcagccacac
attccgtcctaccagcaaataaactgtgtggacagcattattaggtacttggagagctgt
acgacgccggggctgaagaggaagagtgagtcacactctttggcgacctcctcctcctcc
tcctcctcttcctcctcctcgtctgaagaagacaaagctctcactgctccatcagaggac
gtgaccaaccccaatgcggggacccttgacagccaggtgtcagcagtctcggcggtgact
gtggcccacaccactgcagcagtggtcggggctccgctgacggacatcgacctctccacc
aaggccatgagcgtggtgtccgtcaccagccagtgcagctacagcagcaccatcgtacac
gtgccccagcccgagtcagaggtgaccgccctggaggacgccccgatgggcagcgagccc
acggaccagaccccggcgccggcgcgacccaccccaagctccgcagcggctgaagagttc
cgcatggtgggcctgaccaaggaggtcctgtcggcgcacacgcagaaggaggagcacgag
tacgtggaccgcttccgccaccgtatcctgcagagcccctacagctcctatctgcagcag
gacaccggcagcctggcgcactcccaccacagaggtgattatgtcatgcagccagtgagc
gcgggcggctttaagtccaagtcgggcaagcccaaacacaagcgccccaagccgcaggac
tcgtccgacagccacggctccacgccgcggccgtcgcgacggccccccaacccgccgcac
tcctcctggccctcgtccgagtcgtcccacccgcagcacgccgccgccgggggctacccc
atgccccctcctctagtgatgcccctccagccgtcggggcccttctacagcgcggagggg
gatcagatggggggccccaagcaaggcgacgtaccggtgggcgccatacccatgatgccg
cagcccgacccggccttccagcagatgcagcagacggcgcagggcctcaacccatacatg
acgccagtcatggccgtcatcctgcccaacttccccacctacccgccaggctacccgatg
ttccagcaggcccagcccctggctcccttcaacatggccgcctacgcccccatggccccc
acactcttctcccccaacaccctggtcaaccagcagcagcagcagccaccgctgggcatc
cccgtgcctcccgtgccccccgtgcccagctcgccgcagccctggctgggggaggaggat
ctagacgaggcgcagccgcccgcactcttctccagctcacgctccagctcgccgctgcag
ctcaacctgctgcaggaggagctgcccaagcccgccgagccccagagcagcacgggacgc
cccgagagcctccacgaacagcacaacaaaggggaggatgcccccagtgagtccgggaat
caggacgctctgtccacctccagtgagctgctggacctgctgatgcaagaggacgctcgc
tcgggaaccggctccaatgcctccggcagcggctccggggagtcgggcggctcactcggc
tccggctcgggttcgggatccaacggcacctccaccagccacacaggcagcagcaacagc
agcaagtactttgccagcaacgactcgtcggacacgtcccgcaaggcccgcaagagccag
gaggccccggagcacgtccactttgagcacgccgccgtgcaggactcactctggaccatg
atccagcacacgcccgagactgtcatgatgaactaccagatgctcccaagggaccagacg
caggtgctgaaggaggaccaggagaagctgcggctgctgcagcccctgcagccctggttc
acacaggagcagcgcgaggagctggccgaggtccacccctggatccagcagcacggcatc
ccgcaggagatagacacgcagggttgtgtgatctgcagcaccatggatgcaggaccaggc
tctccgaggtcccccagccctcccaccccggtaagctccgtgccccaggaggagaccccc
caggagccaagcacggcccccaacacctga

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