Alosa sapidissima (American shad): 121707692
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Entry
121707692 CDS
T11137
Symbol
slc16a1a
Name
(RefSeq) monocarboxylate transporter 1a
KO
K08179
MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121707692 (slc16a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asad02000
]
121707692 (slc16a1a)
04147 Exosome [BR:
asad04147
]
121707692 (slc16a1a)
Transporters [BR:
asad02000
]
Solute carrier family (SLC)
SLC16: Monocarboxylate transporter
121707692 (slc16a1a)
Major facilitator superfamily (MFS)
Organic acid transporters
Monocarboxylate transporter (MCT) family [TC:
2.A.1.13
]
121707692 (slc16a1a)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of microglial cells
121707692 (slc16a1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Ninjurin
Motif
Other DBs
NCBI-GeneID:
121707692
NCBI-ProteinID:
XP_041946351
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Position
4:21845063..21863129
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AA seq
459 aa
AA seq
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MAPAVGGPVGYTPPEGGWGWMVVVGAFISIGFSYSFPKSITVFFKEIEVIFNATSSQVSW
ISSIMLAVMYAGGPVSSILVNKYGSRPIMMAGGCLAGIGMISASFCDTVEGLYFCVGVIG
GLGLAFNLNPALTMIGKYFYKKRPIANGIAMAGSPVFLSTLAPLNTWFFDHFGWRGSFRI
LGGMLLNCCVAGALMRPIGPKPQPPEKASNSTESTSLVQKINGFIDLTLFKHRGFLLYLM
GNVVMFFGLFSPLVFLSNYAKSKDIPKDKAAFLLSILAFVDMVARPTMGIVANTKWVRPR
VQYFYAASALLNGICHVLAPQSVDYTGFIIYALFFGFAFGWLSSVLFETLMDLVGAQRFS
SAVGLVTIIECGPVLLGPPLLGKFNDIYHDYKYTYYGCGIILIVSSVILFIVMGINYRLL
DKEAKEEAKKAKLEVEPKDNGTRERGRMDEDGKTAEDAV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcacctgccgtaggtggaccggtcgggtacaccccgcccgagggaggctggggctgg
atggtcgtggtcggggccttcatctccattggcttctcctactccttccccaagtccatc
accgttttcttcaaagagattgaggtcatctttaacgccaccagctcccaagtgtcctgg
atctcgtccatcatgctggccgtcatgtacgctggaggtcctgtcagcagtatcctggtg
aataaatatgggagccggcccatcatgatggctggcgggtgcctcgctggtatcggcatg
atctctgcctccttctgtgacacagtggagggcttgtatttctgtgtgggtgtgatagga
ggtctagggttggcatttaatctgaatccagcgctcaccatgattggcaaatacttctac
aaaaagaggcccattgccaatggcattgccatggcgggaagcccagtcttcctctccaca
ctagctcccctcaacacctggttctttgaccactttggatggaggggcagtttccggatc
ctgggcgggatgttgctgaactgctgtgtggccggcgccctgatgcggccaatcgggccc
aagccgcagcccccagagaaggccagcaacagcacagagagcacctcactggtccagaag
atcaacggcttcattgacttgacgctgttcaagcaccgaggcttcctcctctacctcatg
ggcaatgtggtgatgttctttggccttttctcacccctcgtattcctcagcaactatgcc
aagagcaaggacatccctaaggataaggccgctttcctcctttccattctggcctttgtg
gacatggtggcacggcccaccatgggtatcgtagccaacaccaagtgggtgcggcccagg
gtgcagtacttctatgctgcctcagcactcttgaacgggatctgccatgtgctggcgccc
cagtcggtcgactacactggttttatcatctacgccttgttcttcggctttgcattcggc
tggctcagctcggtgctctttgagacactcatggatctggtgggcgcccagcggttctcc
agtgctgttggactggtgaccatcatagagtgtgggcctgtgttacttggccctcccttg
cttgggaaattcaatgacatctatcatgactacaagtacacatactatggctgtggaatc
attctgattgtgtccagcgtgatcctgtttatagtcatggggatcaactacaggttgctg
gataaggaggccaaagaggaagccaagaaagctaaactggaggtcgagcccaaggacaat
gggaccagagagcggggccgaatggatgaggatggcaaaaccgctgaggatgctgtctaa
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