Alosa sapidissima (American shad): 121707725
Help
Entry
121707725 CDS
T11137
Name
(RefSeq) AP-5 complex subunit beta-1-like isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asad03400
]
121707725
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
121707725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_N
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
121707725
NCBI-ProteinID:
XP_041946405
LinkDB
All DBs
Position
4:complement(19867437..19885300)
Genome browser
AA seq
924 aa
AA seq
DB search
MASLTWSQRISAFSLSPSQFLSSITSDSFLAELLRELRDDKASDNTKVLLLSPFLEHPTI
LCPTVSVGEETALELMSVLAQTPPKAVSLKCNLMVAISTVLICTTCMERQPKVAEDYLDQ
LFHTIEDTNDHRGGLSLQPIRATSCECLREMEMSYPGLLSQRLETLYQLKQLETTVVHQA
YSALYTLTLKNAVFLLCQKEEVANADLKTVLCANEGFGWKAIHKPLPPAIFSQMEEIPQL
RTGVDCKELKSIVSSLLEESYLLTPMSQAALLRELVDIVSMVPSLSPALFKSQLLRLFGT
AQVELVHATLMMKSAFTDSLFSPDDENFFLKRLVCMAQHPLLNIPEKLFYIDCIRHFPEN
RPISSQGDESLPVLVTPRLTISLLPTVFNDSSTMLCRLKLMCMVYLEADEGEDSKGVAYL
FDHLMALLKIVDNHGRREMVVTAFRAVFIFLTYFSQMENLPEVLIQKLSELYSRQCRLAP
NLINLCDRIQGCMEDSVWSVKLLKSLQRLVVDMPPSQLTLQNFSWHLKILKRAAVEKQIP
QGSSLYFLLKVLYHSSLCERGGWKVGNAILAVCRNLLLHPCVNQASVSAELADLLHHMAG
HYDDTDIRDHARFYYTLLTNLSLEKLSGVLVQSQEGGQAKVRSLSAIMAETEGLSSHLTI
HPTSGPVLQFVRLQHVSFPPVTYSTEDTTAVENVLDHYRSQFSDADFASEVTLKYKLAYL
GETEPLFEKLFSICLSFDLKDSNYEDMCDIHVPCLFRDRKPPEVSLKLKPKQPYPTCFKA
SAVFSTEDGLTWQTQLPDVKVCFPDIFLPMPVPVGSSSSYKENVFDRLWEDICATEADRS
AISLFCFEGKDNSLQVMNKQIFQNFLISDPSDIGECKVLFFLPPRFHILFRINLTEDAVK
IDIGTDNWELLPHINSYLLKITEK
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctaacctggagtcaaagaatatctgcattttcactgagtccctctcagttc
ctctccagcataacatcagatagcttcctggcggaactcctgcgcgaactgagagatgac
aaagccagtgataacacaaaggtcctcctgctgtctccattcctggaacatcccacaatc
ctctgccccacggtctcagttggagaggagacggcactggaattgatgtccgttctggcc
cagacgccaccaaaagctgtcagtctcaaatgcaatctgatggtagccatatctacggtc
ctcatttgcacaacctgcatggagagacagcccaaggtggcagaggattacctggaccag
ctgtttcacaccattgaggacaccaatgaccacaggggaggcttgtccctccagcccatc
cgagccacatcctgtgaatgcctacgggaaatggaaatgagttacccaggactgttgtca
cagagactagaaaccctttatcaattaaagcaactggagaccactgtggttcatcaagcc
tatagtgctctttacacactgaccctcaagaatgctgtttttctcctctgtcaaaaggaa
gaagttgctaatgctgatctaaagacagtgctatgtgcaaatgagggatttggatggaaa
gctatccataaacctttgccacctgcaatctttagtcaaatggaagagatcccacagctt
aggacaggtgtggactgtaaagagttgaaatcaattgtgtcttcattattggaagagtcc
taccttttaactcccatgtcccaggccgctttgctcagagagctcgttgatattgtttct
atggtaccatccttgtcccctgctttgttcaagtcccagctgttgcggctgtttgggaca
gctcaggtggaattggtgcatgccacgctgatgatgaagagtgcattcactgatagtctc
tttagtcctgatgatgagaacttcttcctgaaacgtcttgtgtgcatggctcagcatcca
ctgctcaatatcccagagaagctcttctatatagactgtatacgtcacttccctgagaac
agacccatctccagccagggagatgaaagcctacctgtgctggtcacacctcgccttaca
atatctctcctgccgactgtattcaatgatagtagcaccatgctttgccgtctgaaactc
atgtgcatggtgtacctggaggctgacgagggagaggacagcaagggggtggcctactta
tttgatcatttgatggcactcctcaaaatagttgataaccatggtcgcagggaaatggtg
gtgacggcatttagagctgtctttattttccttacttacttttctcaaatggaaaacctg
ccagaagtgcttattcagaagttatcagagctgtattcaaggcaatgccgtcttgctcca
aatttaatcaacttgtgtgatagaattcagggttgcatggaggattccgtgtggtctgtg
aaattgctgaaaagcttgcagagattggtcgtggatatgcccccatctcagttgactctg
cagaacttcagctggcatctcaaaatcctgaaaagagcagcagtggagaaacagatacct
cagggaagctccctttactttctgctcaaagtcctataccactctagcctctgtgagagg
ggaggttggaaagtaggtaatgcaattctcgcggtgtgtcgcaatctactcctccatccc
tgtgtgaatcaggcctctgtctcagctgagttggccgatttgcttcaccacatggctggt
cactatgatgacacagacatccgagatcatgctaggttttactacaccttgctcacaaat
ttgtcattggagaagctgtcaggagtgttggtgcaaagtcaggaaggaggtcaggctaaa
gtgagatctttgtctgccatcatggctgaaacagaagggctctccagtcatctcaccata
caccctacctcagggccagtattacagtttgtgaggctacagcatgtcagttttcctcca
gtgacatactccacagaggacaccactgcagtggaaaacgtcctggaccattataggagt
caatttagtgatgcagattttgcctcagaagttaccctaaagtacaaacttgcataccta
ggtgagacagaacctttgtttgaaaaacttttctcaatctgtttgagctttgacctgaaa
gattcaaattatgaagacatgtgcgacatccatgtcccatgcctgttcagagacaggaag
ccccctgaggtaagtctcaagctgaagcctaaacagccctacccaacatgctttaaagct
agtgcagtgttcagcactgaagacgggctcacttggcaaactcagcttcctgatgtcaaa
gtgtgcttcccagacatctttttgccaatgcctgtacctgtaggttcatcatcctcctac
aaggaaaatgtttttgaccgcctttgggaagatatctgtgccacagaagctgataggtca
gcaataagcttattctgttttgagggcaaggacaattcccttcaagtaatgaacaaacag
attttccaaaacttcctaatatccgatccatctgacataggcgaatgcaaggtcttgttt
ttccttccgcctcggtttcatatactatttaggataaatctgactgaagatgctgtcaaa
attgacataggaactgacaactgggaactgttacctcatatcaactcttacttattgaag
ataacagagaaatga
DBGET
integrated database retrieval system
