Alosa sapidissima (American shad): 121707763
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Entry
121707763 CDS
T11137
Symbol
top1l
Name
(RefSeq) DNA topoisomerase I, like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asad03032
]
121707763 (top1l)
Enzymes [BR:
asad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121707763 (top1l)
DNA replication proteins [BR:
asad03032
]
Eukaryotic type
DNA Topoisomerases
121707763 (top1l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
ADPrib_exo_Tox
Motif
Other DBs
NCBI-GeneID:
121707763
NCBI-ProteinID:
XP_041946491
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Position
4:15331123..15351856
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AA seq
757 aa
AA seq
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MSGDNAHNDSQIDSGSRYNDSHKHKDKYKDKEHKHKDHKKDKEREKSKHSNSEHKDFSDK
KHRDKDKLKHKDGSSDKPRDKDKYKDKEKRKEEKKSLEGKIKKENGFASPPRIKSEPDGE
DFYHSPKSLKRERDEDDSEYKPKKIKVENDREDKKAKKRKQGDDEDIKPKKKTKDKKGVV
ADGKKKGKKEPEEKWKWWEEERYTDGSKWKFLEHKGPVFAPPYEPLPSNVKFYYDGKTMK
LSPGAEEVATFFAKMLEHDYTTKDIFRKNFFKDWRKEMTSEEKAKISDLNKCNFTELNEY
FKAQSEARKQMTKEEKQKIKEENERLLQEYGFCIMDNHRERIANFRIEPPGLFRGRGDHP
KMGMLKRRIRPEDIIINCSKDSKHPKPPPGTKWKELRHDNKVTWLVSWTENIQGSIKYIM
LNPSSRIKGEKDWQKYETARRLKKCVDRLRAQYREDWKSKEMRIRQRAVALYFIDKLALR
AGNEKEEGETADTVGCCSLRVEHINLYPEKDGQEFVVEFDFLGKDSIRYYNKVPVEKRVF
KNLQLFMENKQPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASITLQQQLKELTTP
DENVPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDAKKDQLADAKRELKSA
KADAKVRRDEKAKKAVETKKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRI
SIAWCKKWGIPVEKIYNKTQREKFAWAIDMAEEDYEF
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggacaatgcccacaacgattcccagatcgattctggatctaggtataatgat
tctcacaaacacaaagataagtataaggacaaagaacacaaacacaaggaccataagaag
gacaaggagcgtgagaaatcaaagcacagcaacagcgagcataaggacttctcagacaag
aaacacagagacaaagacaagctgaagcacaaagatggctcctccgacaaaccgcgagac
aaagacaaatacaaggacaaagaaaagaggaaggaggagaagaagtccttggaaggcaaa
atcaagaaggaaaatggctttgccagtcctccacgtataaaatccgaaccagacggtgag
gacttctaccactctcccaagtccctgaagcgtgaacgtgacgaagatgactctgaatac
aagcccaaaaaaatcaaagtagagaatgatcgcgaggacaaaaaggcaaagaagaggaaa
caaggggacgacgaggacatcaagcccaaaaagaagaccaaagacaagaagggagttgtt
gccgatgggaagaagaaagggaagaaagaaccggaggagaagtggaaatggtgggaggag
gagaggtacacagatggctccaagtggaagtttctggaacacaaagggccggtgtttgcg
cctccttacgagcctctccccagcaacgtcaagttctattatgatggcaaaactatgaag
ctcagtcctggcgccgaggaagtggccaccttctttgctaaaatgctggaacacgattac
accaccaaggacatcttccggaaaaactttttcaaagactggagaaaggaaatgacatca
gaggagaaggccaagatctcagatctgaacaagtgcaacttcacagaattgaatgagtac
ttcaaggctcagtcggaagccagaaagcaaatgactaaagaggagaaacagaaaatcaaa
gaggagaacgagcgcctcctgcaggagtacggcttctgcatcatggacaaccaccgggag
cgcatcgccaacttccgcatcgagccaccgggactcttccgcggtcgtggcgaccacccc
aagatgggcatgctgaagcgccgtatccggcctgaggatatcataatcaactgcagcaaa
gattccaagcaccccaaaccgccccctggcaccaagtggaaggagcttcgccacgacaac
aaagtgacctggctcgtgtcgtggactgagaacatccaggggtccatcaagtacatcatg
ctcaatcccagctcgagaatcaagggcgagaaagattggcagaagtacgagacggcccgg
cggttaaaaaagtgtgtggaccggctccgggcccagtaccgggaggactggaagtccaaa
gagatgaggattcggcagcgagctgtagcactctacttcatcgacaagttggctctgaga
gctggtaacgagaaggaggagggagagactgctgacactgtgggctgctgctcgctccgg
gtggagcacatcaacctctaccccgagaaggatggccaggagttcgtggtggagttcgac
ttcctgggaaaagattccatccgctactacaacaaggttcccgtggagaagcgggttttc
aagaaccttcagctgtttatggagaacaagcagccagaagatgacctgtttgaccgcctt
aacacctccattttgaacaagcacctccaggagctaatggacggcctgacggcaaaagtg
ttccgtacctacaacgcctccatcaccctgcagcagcagctcaaagagctgaccactccc
gacgagaacgtccctgccaagatcctctcctacaatcgcgccaaccgggctgtagccatc
ctgtgcaaccaccagagggcgcctccaaaaacctttgagaagtccatgcagaacctgcag
accaagatcgatgctaagaaggaccagcttgccgacgcgaagcgagagctgaagagtgcc
aaggcggacgccaaagtacggagggacgagaaggccaagaaggctgtggagaccaagaag
aaggcggtgcagaggatagaagagcagctgatgaagctggaggtgcaggccaccgaccgc
gaggagaacaagcagatcgccctcggcacctccaagctcaactatcttgacccacgcatc
tccatcgcctggtgcaagaaatggggcattcctgttgaaaagatctacaacaaaactcaa
cgagagaagtttgcctgggctatcgacatggctgaggaggactatgagttttaa
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