Alosa sapidissima (American shad): 121707852
Help
Entry
121707852 CDS
T11137
Symbol
ppfia4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121707852 (ppfia4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121707852 (ppfia4)
Membrane trafficking [BR:
asad04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121707852 (ppfia4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
ATG16
DUF745
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
121707852
NCBI-ProteinID:
XP_041946647
LinkDB
All DBs
Position
4:complement(34431623..34566436)
Genome browser
AA seq
1246 aa
AA seq
DB search
MMCEVMPTINEGDSMSSQRGSQNGTDAEANFEQLMVNMLDERDKLLESLRETQETLFQSQ
TKLQDALHERDLLQRQLNSALPQEFATLTKELNVCREQLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVA
LERITTLEGQLATANQELMVVRQRKDRPDAEDRMNGSKPIWKRLPNGSIDAHDEGSRCVE
LQELLEKANKELTQSRERVGMLSTRVTDLETELTTARKDLVKSEEQSAKHQRDIREAMAQ
REDMEERITTLEKRYLAAQRETTSIHDLNDKLENELATKDSLHRQSEEKVRHLQELLELA
EQRLQQTMRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQLESQLEEKNQELGRAR
QREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNALIHDLERCQKQLEEFH
HTKERLIGEIEKLRTEIDHLKRRSGVFGDGTHPRSHMGSATDLRYSMVEGQGDHYSTAVM
RRTQKGRMVALRDEPNKILPVVEKDWERSQPSSLRASRTHLMESDAELSDLDDDDRETIF
SSGDMLSPSGHSDAQTLALMLQEQLDAINEEIRMIQVEKESAELRADEIESRVNSGSMDG
LNVTLRPRPSMPTSVTALSLASSCSPPVSGRSTPKMASRSAAHELGIMTLPSDLRKHRRK
VASPVETREDKPTIKCETSPPSSPRSIRLDQMSFSQLTSGLEDGRGTLKKKGIKSSIGRL
FSRKEKGRLDQPMVKDGQMTPPIIPASGWLEETAVISRPLVPLVPAPSSSRSEGPSNTEH
YYNFDMGIGDTMTLSKLGTQAERDRRMKKKHELLEDARRKGLPFSQWDGPTVVSWLELWV
GMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVTLTSPSAPL
TSRTSSGNVWVTHEEMETMATSTKADNEEGSWAQTLAYGDMSHEWIGNEWLPSLGLPQYR
SYFMECLVDARMLDHLTKKDLRTHLKMVDSFHRASLQYGIMCLKRLNYDRKELERRREEC
QHDIRDTLVWTNEQVVQWVQTIGLKEYSGNLSESGVHGALIALDETFDYSSLALILQIPM
QNTQARQVMEREFNNMLALGTDRRVDESDDKSFRRSPSWRKRFRPRDGQGLGMMPGSMET
LPAGFRLTTMSMPPSMAVVPKKQLQPEAAPPPPQRLDPSAVRTYSC
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaagtgatgccgaccattaacgaaggggactccatgagttcccaacgtggc
tctcaaaacggcacggatgccgaggccaatttcgagcagctgatggtgaacatgctggac
gagagagacaagcttctggagtccctgcgcgagacccaggagacgctgttccagtcccag
accaagctccaggacgcgctgcacgagcgggacctgctccagcgacagctcaactccgcg
ctcccgcaggaatttgccacacttaccaaggagctgaatgtgtgtcgagaacagctgttg
gagaaagaggaggaaatctctgagctcaaagccgaaaggaacaatactaggctgttgctg
gagcacctggagtgtttggtgtcacgtcacgagcgctcgctgaggatgacggtggtgaag
agacaggccccacccccgtctggcgtctccagtgaggtggaggtcctcaaggccctcaaa
tccctctttgaacaccacaaggccctggacgagaaggtgagggagaggttgagggtggca
ctggagaggatcacaaccctggagggacaactggctacagccaatcaggagctgatggtg
gtgaggcagcggaaggacagaccagatgctgaggacaggatgaacggatccaagcccata
tggaagaggctgcccaacggctccatagacgcgcatgacgaggggagccggtgtgtggag
ctgcaggagctgctggagaaggccaataaggagctgacgcagagccgtgagcgagtgggc
atgctcagtacgcgcgtcaccgacctggagaccgaactgaccaccgcccgcaaagacctg
gtcaagagcgaggagcagagcgccaagcaccagagggacatccgtgaggctatggcacag
agggaggacatggaggagcgcatcaccaccctggagaagcgttacctggccgcccagagg
gagaccacgtccatccacgacctcaacgacaagctggagaatgagctggccaccaaggac
tcgctgcacagacagagtgaggagaaagtgcgccacctgcaggaactgttggagcttgcg
gagcagcggctgcagcagaccatgaggaaggcggagactctgccagaggtggaggcggag
cttgcgcagagagtggccgccctctccaaggctgaggagcgccatggcaacattgaggag
cgcctgcgacagctggagtcccagttggaggagaagaaccaggagttgggcagggcgcgc
cagcgggagaagatgaacgaggagcacaacaagcggctgtcagacacagtggaccgcctc
ctcaccgagtctaacgagcggctgcagcttcacctgaaggaacgcatggctgcgctggag
gataaaaatgccctcatacatgacctggaaagatgccagaaacagctggaggagtttcac
cacactaaggagcggctgatcggagagatagagaagcttcggacggagatcgaccacctg
aagcgcagaagtggagtctttggagatggaacacaccctcggtcccacatgggcagtgcc
accgacctgcgctactccatggtggaggggcagggcgatcactacagcacggccgtgatg
cgccgcactcagaagggcagaatggtggcgctgagggacgagccaaacaagatcctgccg
gtggtggagaaggattgggagcggtcccagccctccagcctgcgggccagccgcacacac
ctgatggagagtgacgcggagctgtccgacctggacgatgacgaccgcgagaccatcttc
agctcgggagacatgctgtcaccaagcggtcactccgatgcccagacactggccctcatg
ctgcaagagcagctggacgccatcaacgaggagatcaggatgatccaggtggagaaggag
tcagcggagctgcgagcggacgagatcgagagccgggtcaacagcggcagcatggacggc
ctcaacgtcacgctcaggccccgcccctcaatgcccacctctgtcaccgccctctcattg
gccagctcctgctcgccgcccgtcagcggacgctccacccccaagatggcgtcgcgctcc
gcagcccatgagctgggcattatgaccctgcctagtgatttaaggaaacaccgcaggaaa
gtagcctccccagtggagactcgtgaggacaagcccaccatcaagtgtgagacgtcacct
ccatcctccccccggagcatccgcctggatcagatgagcttctcccagctcaccagcggc
ctagaggatggacgcgggaccctgaagaagaaaggcattaagtcatccatcggaagactc
ttcagccgcaaggaaaagggccgcctggatcaacccatggtgaaggacggacagatgacc
cctcctatcattccagcctccggatggctggaggagaccgcggtcatcagcaggcctttg
gttcctttggttcctgcccctagttccagtcgcagtgaaggcccgtcaaatacagaacac
tactacaatttcgacatgggcatcggtgacaccatgaccctgagcaagctgggcacgcag
gcggagcgggaccggcgcatgaagaagaagcatgagctgctggaggatgcaaggaggaaa
gggctgcccttctcccagtgggacggacccacagtagtatcctggttggagctgtgggtt
ggcatgccggcgtggtacgtggcggcgtgccgtgccaacgtgaagagtggtgccatcatg
tctgcgttgtcggacacagagatccagagggagattggcatcagcaacccgctgcaccga
ctcaaactgcgactcgccatccaggaaatggtcactttgaccagcccctccgcccccctc
acatcacgcacatcctccggaaatgtgtgggtgactcacgaggagatggagaccatggcc
acgtccactaaagcggacaacgaggagggcagctgggcacagacgctggcgtacggcgac
atgagtcacgagtggattgggaatgagtggctgcccagtctgggcctcccgcagtaccgc
agctacttcatggagtgtctggtggacgcacgcatgctcgaccacctcaccaagaaggac
ctgcgcacacacctcaagatggtggacagcttccatcgagcaagtttacagtatggcatc
atgtgtttgaagcgactgaactatgatcgtaaagaactggagaggagacgagaggaatgc
cagcacgacatcagagacacgctggtgtggacgaatgagcaggtggtccagtgggtccag
acgatcggcctgaaggagtacagcggcaacctgtcggagagtggagtacacggggccctg
atcgctctggacgagaccttcgactacagcagcctggccctcatcctgcagatccccatg
cagaacacacaggccagacaagttatggaacgggagttcaacaacatgctggcacttggc
accgatcgtcgggtagacgaaagtgacgataaatcgtttcggcggtcgccctcctggcgt
aagcgctttcgtccgcgggacgggcagggcttgggcatgatgccaggctccatggaaacg
ctgcccgccggattccgcctcaccaccatgtctatgccaccctccatggccgtagtgccc
aagaaacagctgcagcctgaagctgctccccctcccccacagagacttgacccctccgct
gtcaggacttattcctgctaa
DBGET
integrated database retrieval system
