Alosa sapidissima (American shad): 121708442
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Entry
121708442 CDS
T11137
Symbol
acsl6
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00061
Fatty acid biosynthesis
asad00071
Fatty acid degradation
asad01100
Metabolic pathways
asad01212
Fatty acid metabolism
asad03320
PPAR signaling pathway
asad04146
Peroxisome
asad04216
Ferroptosis
asad04920
Adipocytokine signaling pathway
Module
asad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121708442 (acsl6)
00071 Fatty acid degradation
121708442 (acsl6)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121708442 (acsl6)
09143 Cell growth and death
04216 Ferroptosis
121708442 (acsl6)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121708442 (acsl6)
03320 PPAR signaling pathway
121708442 (acsl6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
asad01004
]
121708442 (acsl6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121708442 (acsl6)
Enzymes [BR:
asad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121708442 (acsl6)
Lipid biosynthesis proteins [BR:
asad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121708442 (acsl6)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of breast milk
121708442 (acsl6)
Exosomal proteins of breast cancer cells
121708442 (acsl6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121708442
NCBI-ProteinID:
XP_041947020
LinkDB
All DBs
Position
5:complement(21911585..21981839)
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AA seq
758 aa
AA seq
DB search
MENIFLLVVKNVIPFYRTKRGSSSCCDRKWSMGVVLHMIYLVRLSHEDTIVKQELSSTLM
ERMQAQDLLRSLRLPELDDLSQFFRSLPTSTLVGLGALTAVLAYWLATRPRAIKPPCDLR
HQSEQLQDGSHRSMLGDSPKLLSHYHEDAKTMYEVFRRGLHIAGDGPCLGSRLPNQPYKW
ISYKEVIARAEHLGSGLLEQGCKAGSEQLIGVFAQNRPEWIISELACYTYSMVVVPLYDT
LGADAIRYIINRAEIATVICDKPEKAKVLLGNVESQETPGLKRIVLMDSFESQLVEKGER
CGVQVQALKDIEALGREHHKKPVPPRPDDLSIVCFTSGTTGNPKGVMLTHGNVVADFSGF
LKVTDKVIFPNQDDCLISFLPLAHMFERLIESVVFCHGGRVGFFQGDIRLLSDDMKELRP
TVFPVVPRLLNRMYDKIFSQANTPLKRWLLNFAAKRKGREVCNGIIRNDSLWDKIFFHKI
QASLGGRLRMIITGAAPVSPTVLGFLRAALGCQVYEAYGQTECTAGCTFTTPGDWTSGHV
GAPLPCNSIKLVDVPEKNYYANRGEGEVCVKGPNVFKGYLKDPERTAETLDTDGWLHTGD
IGKWLPNGTLKIIDRKKHIFKLAQGEYISPEKIESIYIRSEPVSQLYVHGDSLQSCLVGI
VVPDPEVMPSWANKKGFQGNYDDLCNNMDVKKAIMDDMVGLGKSSGLHSFEQVKDIYVHN
EMFSIQNGLLTPTLKAKRPELKEYFKEKIEQLYTNISM
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatttttttgttggtggtgaagaatgtgattccattctacagaaccaaacga
ggaagtagctcatgctgtgacaggaagtggtctatgggagtggtgctgcacatgatctat
ctggtgaggctgtcacatgaggacacaatagtaaagcaagagctcagttccactctgatg
gaaaggatgcaggctcaggatttgttgcgcagtctgcggttgcccgagctagatgacctc
agccagttcttccgatcgctgcccacctccacgctggtcggcttgggggcactgacggcc
gtgctggcctattggctggccacccgcccacgcgccatcaaaccaccatgtgatctccga
catcagtcggagcagttgcaggatgggtcccacagatctatgctgggagacagtccaaaa
ctactgtcacactaccatgaggatgcaaagaccatgtacgaggtgttcaggaggggcctt
cacatagctggtgatggaccctgtttgggctcacggttacccaatcagccctataagtgg
atctcctataaagaggtaatagcccgtgcagagcatctgggctccgggctactagaacag
ggatgcaaagctggctccgagcagctcatcggcgtgttcgcacaaaacagaccagagtgg
atcatttctgagctggcctgctatacatactctatggtagtggtgcccctgtatgacacg
ttgggtgctgacgctattcgatacatcatcaacagagcggagatagccacggtgatctgt
gacaagccagagaaggcgaaggtgcttctgggtaacgtggagagccaggagacgcccggc
ctgaaaaggatagtgctcatggactccttcgagtcccagctggtggagaagggcgagagg
tgtggggtgcaagtccaggccctgaaagacatcgaggccctgggcagagagcatcacaaa
aagccagtgcctccgcggccagacgacctgtccattgtctgcttcaccagcggaacaaca
ggaaatcccaaaggagtcatgcttacccacggcaatgttgtagcagacttctcaggcttt
cttaaagttactgataaagtaatcttccccaaccaggatgactgtctcatttcatttcta
ccccttgctcatatgtttgagagactcattgagtccgtagtgttctgtcatggagggagg
gtggggttcttccagggtgacattcgtctcctgtctgacgacatgaaggagctgagaccc
accgttttcccagtggtgccccggctcctcaaccgcatgtatgacaagatcttcagccag
gccaacacgcctttgaagcgctggctgcttaactttgcagctaagagaaaaggaagagaa
gtatgcaatggtatcatccgcaatgacagcctgtgggataagatattctttcacaagata
caggccagtttgggaggacggttacgaatgatcatcacgggggcagcccctgtttcccca
acggtgctggggttcctcagagcagccctaggctgccaggtgtatgaggcgtatggccag
actgagtgtactgctggctgcacgttcaccactccaggggactggacttcaggccatgtt
ggtgctcctctcccctgcaattccatcaaactggttgatgtcccagagaaaaattattat
gccaacagaggagaaggagaggtgtgtgtgaaaggtccaaatgttttcaagggctacctt
aaagaccctgagcggacagctgagactctggacacagatgggtggctccacaccggtgac
attgggaagtggctacctaatggcacactgaagattattgacagaaagaagcacattttc
aagctcgcccaaggggagtatatatcgccagagaagattgagagtatctacattcgcagt
gagccagtgtcccagctttacgtgcatggggacagccttcagtcgtgtctggtgggaatt
gtcgtaccagatccagaagtgatgccttcttgggctaacaaaaagggctttcaaggcaat
tatgatgatctatgtaacaatatggatgtaaagaaggccataatggatgacatggtgggt
cttggtaaatccagtggcctccattcttttgaacaggtgaaagacatctatgtccacaat
gagatgttctcaatccaaaacggcctgcttacacccacactgaaggcaaaacggcccgaa
ctgaaggaatacttcaaggagaagatcgagcaactctacacgaacatctctatgtaa
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