Alosa sapidissima (American shad): 121708471
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Entry
121708471 CDS
T11137
Symbol
colgalt2a
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00310
Lysine degradation
asad00514
Other types of O-glycan biosynthesis
asad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121708471 (colgalt2a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121708471 (colgalt2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
asad01003
]
121708471 (colgalt2a)
Enzymes [BR:
asad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
121708471 (colgalt2a)
Glycosyltransferases [BR:
asad01003
]
O-Glycan biosynthesis
O-linked Gal type
121708471 (colgalt2a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Glyco_transf_25
Anp1
Motif
Other DBs
NCBI-GeneID:
121708471
NCBI-ProteinID:
XP_041947086
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Position
1:46489389..46496406
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AA seq
606 aa
AA seq
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MPFERVGTGILVTVFVVRLTCAYTSQPIFDMDPIRPESSLLKPKVLIAILARNAEHSLPF
YLGCIDRLDYPKDRIAIWAATDHNVDNTTAMLQDWLSAVDSHYHTAELRTTEESSALFGE
EGPKHWADSRYTHVLKLRQAALRRAKALWADYILFADSDNLLTNPEVLTLLMAENKTLVA
PMLESRTLYSNFWCGMTPQGYYKRTPEYIPIRDGKRDGCHAVPMVHSTFLLDLRRKASRH
LAFYPVHHLYPWIMDDIMVFSFSARQAGVQMFVCNKEHYGYLPVPLKPDQNLEEEVESFS
HTVSEALIEYTLEPSHFLHARPRQKDKMVFDEIYLINLKRRPDRRKRMLSTLDALGLQAT
LTDAVDGKALNTSQLLALGIHMLPNYKDPYSDRVLTRGEIGCFLSHYNIWKQMVEKGQQQ
VLLLEDDVRFEPRFKSRLITIMQDVKAAGLDWDLIYVGRKRLQVKEPERWVEGVKNLVHP
DYSYWTLGYALSLQGARKLLQAEPFGKILPVDEFLPLMFDKHPKEEYMSHFENRDLKAFS
VEPLLLFPTHYTGEPGYTSDTETSNIWDNEGVSTDWDRQSAQKNHAGPRSPVSSSPSSSG
SQRDEL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttgagagagtaggtaccggtatattagttaccgtttttgtggttagactgaca
tgtgcctatacgagtcagcctatttttgatatggacccaattcgacccgagtcatctttg
ttgaagcccaaagtcttgattgccatacttgctcgaaatgcagaacatagtttacctttc
tatctgggatgcatagacagactggactaccccaaggatcgcatcgcaatttgggcagcc
acagatcacaatgtggacaacacaacggcaatgctacaggactggctgagtgcagtagac
agccattaccacacggctgagttgaggaccacagaggagtccagtgcattgtttggtgag
gaggggccgaagcactgggctgactccaggtatacccacgtgctgaagctgagacaggca
gcgctgaggagagccaaggccctgtgggcagactacatactgtttgcagacagtgacaat
ttgctgacaaatccagaagtgttgacactgttgatggctgagaacaagactctggtggct
cccatgctggaatcccgtaccctgtactccaacttctggtgtggcatgactccccagggt
tattataaacgcacccccgagtacatacccatcagagacgggaagcgcgatggatgtcac
gccgttcccatggtgcactccacattccttctggacttgcggcggaaagccagcagacat
ctggctttctacccagtccatcacctttacccctggattatggatgacatcatggtcttc
tccttctcagctaggcaagcaggtgtgcagatgtttgtgtgtaacaaagaacattatggg
tacctgcctgtaccactgaagcctgatcaaaacctggaggaggaagtggaaagcttttct
cacaccgtctctgaggctttgattgagtatactttggaaccatcacatttcttgcatgcc
cgacctaggcagaaggataaaatggtttttgatgagatctacttgatcaatctgaaacgc
aggccggaccggaggaagaggatgttgagcacgttggatgctctgggccttcaggctaca
ctaactgatgccgtggatggcaaagctctgaacacctctcagttgctggcacttggcatt
cacatgctccccaactacaaagacccatattctgaccgtgtcctgacaagaggcgagatc
ggatgtttcctgagtcattacaacatctggaaacagatggtagagaaaggacagcagcaa
gtactcctgctggaggatgatgtacgatttgagcctcgcttcaagagccgtctgatcaca
atcatgcaggacgtaaaggcagctggtcttgactgggacctcatctatgtgggccggaag
aggctgcaggtgaaggagcctgagcgctgggtggagggggtaaagaacctggtgcaccca
gactactcgtactggaccctgggatacgccctctctctgcagggggctcggaagcttctc
caggcagagccctttggcaagattctgcccgtggatgagtttcttcccctcatgtttgac
aagcaccccaaggaggagtacatgtcccactttgagaacagggacctgaaggccttttct
gtggagcctctcttgctcttccccacacattacacgggcgagccgggctacaccagcgac
acggagacctccaacatctgggacaacgagggggtgagcaccgactgggaccggcagagt
gcccagaagaaccacgccggtccccgctctcccgtctcaagctcccccagcagcagtggc
agtcagagggatgaactctga
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