Alosa sapidissima (American shad): 121708475
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Entry
121708475 CDS
T11137
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121708475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121708475
Ion channels [BR:
asad04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121708475
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Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
YVC1_C
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
121708475
NCBI-ProteinID:
XP_041947098
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Position
5:complement(35171562..35186443)
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AA seq
791 aa
AA seq
DB search
MATNPQTFMLESDDRSKEEINADEERKIAEKKRNLLDCALGKSGKDKGPMDTSHVEDEGA
PDIEIRLNVSYILGTEPGESFRQILFDAVASRDVNRLNEIQEHLEKYGKKLSDSLYRLFG
KTPLVKALLNLKNGENDTVKYLLDIAENMGDLKPFVNAAYTGSYYSGQTALHVAIERRSR
YFVELLVQKGADVHAKACGKFFQLHDGPCFYFGELPLSLAACTNQKDIVDFLLENQYQKA
NVCETDSQGNMVLHALVVVADNSPKNTDFIIKMYDHILTKAAQLHPKTKLEEIENKQHLT
PIKLAAKTGKIELLKHMMHREIQGQESTRLSRKFIEWAYGPVSGSLYDLESLDSYGQNSV
LEIIVYGSEIPNRLEMLQVEPLNKLLDEKWDRFAHRIFLFKFLMYLLYVFIFTCVAYFGN
KKMSTEARVLYAAGQQISFWGSLYLFCRELLDIKRRCPNLQSLLIDGYFELIFFLQALLC
IISFVLYWCGKAEHLGFLVLSLALSWLNLLYFSRGFRHMGIYSVMIQKILLGDILRFLLV
YIVFLFGFSAAVVTLMDAPKDHSNTTSASSNQTFQSNINQTAIKHQPDSDSGDSDKPTFN
NFYFTALELFKFTIGMGDLEFTEQYRYKEVFYVLLISYIVLTYILLLNMLIALMSQTVQE
LTEESMSIWKLQRAITILDMERVLPQCLRRRLRSGIERDLGGSAGDNRRWCLRVEESQVK
DWENFNNEQDTICEDPGRQKPAPRPEKVAGEEHAESPVKKKSWSLLRTRFRARVFSNSDH
EQMSPQSPDQA
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggccactaatcctcaaactttcatgctggaatctgatgatcgaagtaaagaagagata
aatgcagatgaagagagaaaaatagctgagaagaagaggaatctcctggattgtgcactg
ggcaagtcggggaaagacaagggacccatggacaccagtcacgttgaggacgagggggcg
ccagatatcgagattagacttaatgtgagctatattttggggactgaacctggggagagc
ttcaggcagatactgtttgatgctgtggccagcagagatgtcaaccggcttaacgaaata
caggaacatctggagaaatacggcaaaaagctctctgactctctctatcgtttgtttggt
aaaactcccttggtgaaggctctactaaacctgaaaaatggggaaaatgatacagtgaag
tatcttcttgacattgctgagaacatgggagacctgaagccctttgttaacgctgcttat
actggcagctattactcaggtcagacagcccttcatgtagccattgagagaaggagtaga
tactttgttgagcttctggtgcagaaaggagctgatgtccacgccaaagcctgtgggaag
ttctttcagctgcatgatggaccctgcttctattttggagagttaccactttccctggca
gcctgcaccaaccagaaagacatagttgacttcctgttagaaaaccagtatcagaaagca
aatgtatgcgagacagactcacaaggcaacatggttctccacgccctggtggttgtagca
gataacagccctaagaacacagattttattattaagatgtatgatcacattctgaccaaa
gctgcccagcttcacccaaaaaccaaactggaggaaattgagaacaagcagcacctcaca
ccaattaaactagcagccaagacaggcaagattgagttgctgaaacacatgatgcatcga
gagatccaagggcaggaaagcactcgcctgtcccgcaagtttatagagtgggcctatggg
cctgtctccggctcgctatatgacctggaatctctggattcatacgggcagaactctgtg
ctggaaataattgtctatggcagcgaaatccccaatcgtctggaaatgcttcaagtggag
ccacttaataaactgttggatgagaaatgggacagatttgcacatcgaatatttctcttc
aaattcctcatgtatcttctgtatgtcttcatcttcacttgtgttgcatactttggaaac
aaaaaaatgtccactgaagcaagagtcttgtatgcagcaggacagcagatatcattctgg
gggtcattgtatttattctgcagggagttactagatatcaaaagaagatgtccgaacttg
cagtctttgctgatcgatggatactttgaactgatttttttcctccaggctctgctgtgc
atcatctcctttgtgctgtactggtgtggcaaggcggagcacctgggctttctggtgttg
agtctggccctgtcgtggctcaacctgctgtacttctccagaggcttcagacacatgggc
atctacagcgtcatgatacagaagatacttcttggtgatatcttgcgcttccttttggtc
tacattgtcttcctctttgggttttcagctgctgtggtcacactaatggatgcgccaaaa
gatcacagcaacacaacctcagcatccagcaatcaaacatttcaatcaaacatcaatcaa
acagcaatcaaacatcagcctgacagtgactctggtgacagtgacaagccaacattcaac
aacttctacttcaccgctctggagctgttcaagttcaccattggcatgggggacctggag
ttcactgagcagtaccgctacaaggaggtgttctatgtgctgctcatctcctacatcgtc
ctcacctacatcttactcctcaacatgctcatcgccctcatgagccaaactgtgcaggaa
ctcacagaggagagcatgagcatttggaaactacagcgggctattactattttagacatg
gagagggttcttccccagtgcctgaggaggaggctgcgctctgggatagagagagacctg
ggtggctccgcaggtgataaccgacgatggtgcctcagagttgaggagtcgcaggtgaaa
gactgggagaactttaacaatgagcaggacaccatatgtgaggatccagggaggcagaaa
cctgcaccccgaccagagaaggtggcaggagaagagcatgcggagtcaccggtgaaaaaa
aagagctggagccttctgaggactcgcttcagggcgcgcgtcttttccaactctgaccat
gagcagatgagtccgcagtcacctgaccaggcctga
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