Alosa sapidissima (American shad): 121708496
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Entry
121708496 CDS
T11137
Symbol
robo4
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121708496 (robo4)
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
ROBO family
121708496 (robo4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_6
Receptor_2B4
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
121708496
NCBI-ProteinID:
XP_041947129
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All DBs
Position
5:26747369..26764567
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AA seq
1171 aa
AA seq
DB search
MQPGTWLLWALWLLTWAEATRQCQCQCTCMPDGTSEVGGAVKPGKEHVRHHHGGHRHLQH
RHRGSRRRGSKPPPDEIPPQIVHHPSDVVVKVGSPATLSCRASGTPEPTIEWLHNGQPLD
MNRQDDPSRPITLHEGSLFFLSVVPARRGQSHEGVYSCVARNSAGKVTSRNASLHIAALR
EEFRVQPSDVEVAVDEVAIMNCSPPIGQPEPNVIWKKDGVLINSTDDHYTVLNGKLIIGP
AQKNDSGVYICVASNTMGVRESQAARLSVLVKPVLVRTPQDVSVKVGEAAHFFCEAEGDP
MPSVEWSREQGPLPNGRYLVNPDKSLQIHYVTDQDSGKYTCTAVNEVGVSTATAVLHVED
ALNTRQKELHKELSALRAELQTVAVMTPSSNMSLVQWKLQSLPTQPHYLDGCEVLYRSLL
PASSDWAAKKVPLPSLQTEVGPLKRGYKYEFKVRPYGSNLYGRESNTRHLRVPEIAPGAP
PQGLSVTMPVDRNDTVLFSWGPPPHDTHNGIIQGYQVWCVQSDGQPFFNWTLDSGTHSLE
IGMLHPGRQYWVRVAAVNGAGVGVKSDPHRLLIENNQRVSHALPASGALPRVLAVVQDPV
FIGSVVVLLWCLLMVTAVCLYRRHTRNSGLGHRHHKSTGLYRLASEDLIIKHRMAAPDSP
WISGAWRPALCGKPYQDLWAQGQESPNPSLSKSTLPITAKKDPGHLESVVPIVPDSCGVY
GTFYVDLSGNNLKTFNSPARRTKMPHYHSADQNCETVIIPQPAARNKAARDGPAMPWRRA
LPSQPNMGVLKESWEKNCKRELHAVKSAPLVPMSQQSRAVGSITGVNKQRLSHQPPALPP
PGGFPDGLKSTSSPRMLHYSASLHLVDMMPPPPRCGEDMHSLSSEEGSSRSTKLTMDVGS
LQSICTPSVVRGAATSATTSVCPSYPGRTYSRLSTASFCRSAEPSLDEDLDLDDATLSTQ
DATQYLEIRPRMDRAGVLPDNLTPRPFSPTPTFGYICGPSEVEEVSERRGHQRGVAGRAQ
LRSTPSSCCSEWEGSLWNAWGSISEGNMPSARTSIISSSDCSFMNDANFARVLALTAESM
TGASLSDFSPSGSPLNVLFPPPRDCFGELDPLPVWDWGTTWVDEMEAQYHAGRTGGATAA
AAASLSSVPDRWGYHHRQDPRQANHKMPSHR
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctggcacttggctcctgtgggcattgtggctccttacctgggcagaggccaca
cgtcagtgccagtgtcagtgcacctgtatgccagacggcacctcggaggtcggcggggcg
gtcaagccaggcaaggagcacgtccgtcatcatcatggggggcatagacacctccagcac
agacacaggggcagtagaaggagaggttccaagcccccgccagatgagatccctcctcag
attgtccaccacccgtccgatgtggtggtgaaggtgggcagccccgccacgctctcctgc
agggcctcgggcaccccagagcccactatagaatggctacacaacgggcagcccctggac
atgaaccgccaggacgacccgtcccggcccatcactctgcatgaggggagcctcttcttc
ctcagtgtggtgcccgcacgaaggggccagtcccatgagggtgtgtactcgtgtgtggcg
cgcaacagcgccggcaaagtcaccagtcgaaatgcctctctgcacatcgcagcgttgcgg
gaggagttccgtgtccagcccagtgatgtggaggttgctgtggacgaggtggccatcatg
aactgcagccctcccatcgggcagccagagcccaacgtcatctggaagaaggacggcgtg
ctcatcaacagcacggatgaccactacacagtgcttaatgggaaattaatcatcggccct
gcccagaagaatgactcgggggtgtatatttgtgtggcgtccaacaccatgggggtgcgg
gagagccaggctgccagactgtcagtattagtgaagccagtgttggtgcgtacaccccag
gacgtgagcgtgaaggttggggaggcggcgcacttcttctgtgaggccgaaggagacccc
atgccctctgtggagtggagccgggagcagggccctctgccaaacggcagatatctggtc
aatccagacaagagtcttcagattcactatgtgactgaccaggacagtgggaagtacacc
tgcactgctgtcaatgaggtgggagtatccacggcaaccgcagtgcttcatgtagaggat
gctttgaacactcggcagaaggagcttcataaggagctgtctgctctgcgtgcagagctt
cagaccgtggctgtcatgactccttcctcaaatatgtctttggtgcagtggaagctccag
tctctaccaacccagccacactacctggatggatgcgaggtgctgtaccgctctctcctg
cctgctagctctgactgggcagccaagaaggtccccctgccaagcctgcagacagaggtc
ggtcccctgaagaggggctacaagtatgagttcaaagtgcgaccatacgggagtaactta
tatggcagagagagcaacaccagacacctcagggtgccagagatcgcccctggtgcccct
cctcagggactgtctgtgacgatgccggtggaccgaaacgacacagttctcttcagctgg
ggtcctccacctcacgacactcacaacgggatcatccagggctatcaggtgtggtgtgtg
cagtcagatggtcagccgttttttaactggacgttggacagtgggacccacagtctggag
attggcatgctgcacccaggcaggcagtactgggtcagagtggcagctgtcaatggagca
ggagtcggcgtgaagagtgaccctcacagactgctaatagagaacaaccagcgtgtgtct
cacgctctcccggcctcaggcgctctccctcgggttctggccgtggttcaggacccggtg
tttattggcagtgtcgtcgtgctcctgtggtgcctccttatggtcaccgcggtgtgcctg
taccgacgccacaccaggaactcgggcctcggccacagacaccacaagagcacaggcttg
tacaggttagccagtgaggacctcatcatcaagcacaggatggcagcgcctgactcaccg
tggatatctggggcctggagaccagcgctgtgcggtaaaccctaccaggacctgtgggcc
cagggccaggagagccccaaccccagcctcagcaagagcactcttcccatcacagcaaag
aaggaccccggccatctagaatctgtcgtccccatagtgcctgacagctgcggggtttac
ggcacattctacgtggatctcagcggcaacaacctcaagaccttcaacagtcccgcccgc
cgtaccaagatgcctcactaccactccgctgaccagaactgcgagaccgtcatcatccct
cagcccgccgccaggaacaaggcggccagggatgggccggcgatgccgtggagacgggcc
ctgccttcccagcccaatatgggggttctcaaggaatcctgggagaagaactgcaagcga
gagctgcatgctgtgaagagcgccccattagtgcctatgtcccagcagtcccgggcagtc
ggcagcatcacaggtgtcaacaaacagagactcagccatcagccgccagccctccctcct
ccaggtgggttcccagacggcctgaagtcgacctcctctccccgcatgctccactactcg
gcctccctgcacctggtggacatgatgccgcccccccctcgctgcggtgaagacatgcac
agcttgagctcagaggaaggctccagcaggtcaaccaagctgacgatggacgtgggctct
ctccagtccatctgcacgccatctgtggtgcggggagcggccacctccgccaccacctct
gtctgcccctcctacccgggccgcacctacagccgcctgtccaccgcctccttctgcagg
tccgcagagcccagcctggacgaggacctggacctggacgacgccacgctctccacacag
gacgccacgcagtacctggagatcagacccagaatggacagggccggtgtactaccagat
aacctcaccccgaggcccttctccccgacccccacgtttggctacatctgtgggccatca
gaggtggaggaggtgagcgagcgcaggggtcaccagcgtggggtggcaggccgggcgcag
ctgaggagcaccccctcgtcctgctgcagcgagtgggaggggtccctgtggaacgcctgg
ggctccatctccgagggcaacatgcccagcgcccgtaccagcatcatcagctcgtctgac
tgctcgttcatgaacgatgccaacttcgcccgagtcctcgccctgaccgcggagtcgatg
actggagccagtctctcagatttctctccttctgggtctcctctgaacgtgctcttcccc
cctccgcgggactgtttcggggagctggaccccttacccgtgtgggactggggcactacc
tgggtggacgagatggaggcgcagtaccacgccggccggacagggggcgccacagctgca
gccgcagccagcctgtcctccgtcccagaccgctggggctatcaccaccgccaggacccc
aggcaggccaaccacaaaatgccatcgcaccgatga
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