Alosa sapidissima (American shad): 121708542
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Entry
121708542 CDS
T11137
Symbol
tcf7
Name
(RefSeq) transcription factor 7 isoform X1
KO
K02620
transcription factor 7
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04310
Wnt signaling pathway
asad04519
Cadherin signaling
asad04520
Adherens junction
asad04916
Melanogenesis
asad05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121708542 (tcf7)
09133 Signaling molecules and interaction
04519 Cadherin signaling
121708542 (tcf7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121708542 (tcf7)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121708542 (tcf7)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121708542 (tcf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121708542 (tcf7)
Transcription factors [BR:
asad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
121708542 (tcf7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
ZNF704_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121708542
NCBI-ProteinID:
XP_041947192
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Position
5
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AA seq
503 aa
AA seq
DB search
MPQLNSGGGDDLGANDEMISFKDEGEQDEKIQENAFTERDLADLKSSLVNESEINQNSNA
AVVRRGHHHHHDEHRVYPEKHREHLEDVSKQDGGMYKAPAYSGYPFLMLTDPYLPGGSVS
PSSNKVSVVQQSHGMTPHGMLLQYPSSDHFNPSPAHLPTDMSQKPGVHRHQSQDLSSFYS
LAPGGVSQISPSMNWQPQPVYPLSSCGFRQSYSSSLPSSSSYPRFSHSLMLGPSGMHPTG
IPHPAIVPPSGKQEHDQYDRNMYAKPHPEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVI
AECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYDAGLRG
AGEEKRKADGGKKKRRKREKQQQQDPTTDPGSPKKCRARFGLNQQTEWCGPCRRKKKCIR
YLQGGRCVSPHSSDGSAIDSPSSPVYPFQQPHSPNPTPPRPPSPASPSSGSPPSKRRHPL
HPHPKLHGLSIQTLTRQHKFPPQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctcaacagtggtgggggagatgatctcggagcgaacgacgaaatgatttcc
ttcaaggatgaaggcgaacaagacgaaaagatccaggagaacgctttcacggagagggac
ttggctgacctcaagtcgtctttggtgaatgaatcggagataaatcagaactcaaacgca
gcggtggtcaggcggggacaccaccaccaccacgatgagcacagagtttacccagaaaaa
cacagagaacatctcgaagatgtgtcgaagcaggatggggggatgtacaaggcaccggca
tactccggttatccattcctgatgctgacagacccatacctcccaggcggatcagtgtca
ccatcttccaacaaagtgtctgtggtccagcagtctcacgggatgactcctcatgggatg
ctgctgcagtaccccagttctgaccacttcaaccctagccctgcacacctgcctacggac
atgagccagaaaccaggcgtccacaggcaccagtcccaggatctgtccagcttctactca
cttgcccctgggggcgtgagccagatctccccctccatgaactggcagcctcagcctgtg
tacccgctgtcctcatgtgggttcaggcagtcttactcctccagcctccccagcagctcc
tcctaccccaggttctctcattctctgatgctgggaccctccggtatgcaccccacaggc
atcccacaccctgcaatagtgcccccttcaggcaaacaggaacatgaccagtacgacaga
aatatgtatgccaaaccccacccagagcccaagagagagaaggagcccaagaagccggtg
atcaaaaagccgctgaacgctttcatgctctacatgaaggagatgagggccaaggtgatc
gccgagtgcaccctgaaggagagcgccgccatcaatcagatcctggggagacggtggcat
gccctgacccgtgaggagcaggccaagtactacgagctggccaggaaggagcgacagctg
cacatgcagctctaccccagctggtccgcccgggacaactacgatgcaggccttagaggg
gccggggaggaaaagagaaaagctgatgggggaaagaagaagaggagaaaacgggagaag
cagcagcaacaagaccccaccacagaccccggctctcctaagaaatgcagagctcgcttc
ggcctcaaccaacaaacggaatggtgtggtccctgcaggaggaaaaagaagtgcattcgc
taccttcaaggaggacggtgcgtcagcccccattcttccgatggaagtgctatagactcg
ccctcctcccctgtgtaccccttccagcagccgcactcccccaaccccacccctccacgc
cccccctcgcctgcctccccgtccagcggctcaccacccagcaaacgacgccaccccctc
cacccccaccccaaactacacggactgtctattcaaactttaaccaggcaacacaagttt
ccgccccaatag
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